RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 SLC28A1O00337 649 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 ADAM17P78536 824 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 SLC5A9Q2M3M2 681 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 C4orf46Q504U0 113 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 SMIM5Q71RC9 77 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 ZNF398Q8TD17 642 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 AGAP11Q8TF27 550 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 ACOT12Q8WYK0 555 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 ZNF354BQ96LW1 612 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 SEMA4AQ9H3S1 761 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 CLEC4AQ9UMR7 237 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 MFHAS1Q9Y4C4 1052 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 ANKDD1BA6NHY2 528 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 WFS1O76024 890 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 CCNE2O96020 404 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 PLEKP08567 350 aaPredicted RBP14.28□□□□□ -0.12
TRPM1-203ENST00000542188 HERVK_113P62684 666 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 SPIBQ01892 262 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 POU6F1Q14863 301 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 SPESP1Q6UW49 350 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 ADGRF2Q8IZF7 708 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 PCDH20Q8N6Y1 951 aaKnown RBP14.28□□□□□ -0.12
TRPM1-203ENST00000542188 EIF1ADQ8N9N8 165 aaKnown RBP14.28□□□□□ -0.12
TRPM1-203ENST00000542188 SIPA1Q96FS4 1042 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 EXD2Q9NVH0 621 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 CXCR2P25025 360 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 ZNF844Q08AG5 666 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 BAATQ14032 418 aaPredicted RBP14.28□□□□□ -0.12
TRPM1-203ENST00000542188 OCLNQ16625 522 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 PTCD2Q8WV60 388 aaKnown RBP14.28□□□□□ -0.12
TRPM1-203ENST00000542188 FNDC11Q9BVV2 318 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 PRDM16Q9HAZ2 1276 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 RBM22Q9NW64 420 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRPM1-203ENST00000542188 PMF1-BGLAPU3KQ54 211 aa14.28□□□□□ -0.12
TRPM1-203ENST00000542188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.27□□□□□ -0.12
TRPM1-203ENST00000542188 ITGB6P18564 788 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 MGAT1P26572 445 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 LHX1P48742 406 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 CPT1AP50416 773 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 MED22Q15528 200 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 PAGE2Q7Z2X7 111 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 ZC3H7AQ8IWR0 971 aaKnown RBP14.27□□□□□ -0.12
TRPM1-203ENST00000542188 ZNF248Q8NDW4 579 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 ERMAPQ96PL5 475 aaPredicted RBP14.27□□□□□ -0.12
TRPM1-203ENST00000542188 CYP3A43Q9HB55 503 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 TRNAU1APQ9NX07 287 aaKnown RBP14.27□□□□□ -0.12
TRPM1-203ENST00000542188 TFR2Q9UP52 801 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 PCDHGA10Q9Y5H3 936 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 RBAK-RBAKDNI3L0D1 243 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 MTA2O94776 668 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 PSME3P61289 254 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 EIF5AP63241 154 aaKnown RBP14.27□□□□□ -0.12
TRPM1-203ENST00000542188 USF2Q15853 346 aaPredicted RBP14.27□□□□□ -0.12
TRPM1-203ENST00000542188 MCCC1Q96RQ3 725 aaPredicted RBP14.27□□□□□ -0.12
TRPM1-203ENST00000542188 UNKQ9C0B0 810 aaKnown RBP14.27□□□□□ -0.12
TRPM1-203ENST00000542188 ANKZF1Q9H8Y5 726 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 GGA3Q9NZ52 723 aa14.27□□□□□ -0.12
TRPM1-203ENST00000542188 TFECO14948 347 aaPredicted RBP14.27□□□□□ -0.13
TRPM1-203ENST00000542188 CCNYL3P0C7X3 344 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 PPP2R2BQ00005 443 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 EGFLAMQ63HQ2 1017 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 PTCHD4Q6ZW05 846 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 TBCBQ99426 244 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 MARCH7Q9H992 704 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 NDOR1Q9UHB4 597 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 ZNF180Q9UJW8 692 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 CAPN6Q9Y6Q1 641 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 MSH4O15457 936 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 LRIG2O94898 1065 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 ALDH7A1P49419 539 aaKnown RBP14.27□□□□□ -0.13
TRPM1-203ENST00000542188 TMPRSS11AQ6ZMR5 421 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 ZDHHC17Q8IUH5 632 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 SLC47A1Q96FL8 570 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 TAF6LQ9Y6J9 622 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 SLC12A8A0AV02 714 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 PRAMEF22A3QJZ6 481 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 CBX4O00257 560 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 UNC5CO95185 931 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 PIGNO95427 931 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 CLUP10909 449 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 CBX3Q13185 183 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 ZNF613Q6PF04 617 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 GLT6D1Q7Z4J2 308 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 ZNF615Q8N8J6 731 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 PIH1D2Q8WWB5 315 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 PPP3R2Q96LZ3 170 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 PHF12Q96QT6 1004 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 ADAM28Q9UKQ2 775 aa14.27□□□□□ -0.13
TRPM1-203ENST00000542188 ADGRL2O95490 1459 aa14.26□□□□□ -0.13
TRPM1-203ENST00000542188 ATP7BP35670 1465 aa14.26□□□□□ -0.13
TRPM1-203ENST00000542188 MAPK9P45984 424 aa14.26□□□□□ -0.13
TRPM1-203ENST00000542188 SCNN1BP51168 640 aa14.26□□□□□ -0.13
TRPM1-203ENST00000542188 PTPN5P54829 565 aa14.26□□□□□ -0.13
TRPM1-203ENST00000542188 MAZP56270 477 aaKnown RBP14.26□□□□□ -0.13
TRPM1-203ENST00000542188 GPAT3Q53EU6 434 aa14.26□□□□□ -0.13
TRPM1-203ENST00000542188 RBM20Q5T481 1227 aaKnown RBP14.26□□□□□ -0.13
TRPM1-203ENST00000542188 ZNF470Q6ECI4 717 aa14.26□□□□□ -0.13
TRPM1-203ENST00000542188 IFNLR1Q8IU57 520 aaPredicted RBP14.26□□□□□ -0.13
TRPM1-203ENST00000542188 SPAG16Q8N0X2 631 aa14.26□□□□□ -0.13
TRPM1-203ENST00000542188 AP1S3Q96PC3 154 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms