RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 TRIM38O00635 465 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 GPR32O75388 356 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 LTFP02788 710 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 TFEBP19484 476 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 MPSTP25325 297 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 TKTP29401 623 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 ARRB2P32121 409 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 ADCYAP1R1P41586 468 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 ERFP50548 548 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 LILRA4P59901 499 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 DNAJB13P59910 316 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 RAB10P61026 200 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 R3HDM1Q15032 1099 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 PIGGQ5H8A4 983 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 NXNQ6DKJ4 435 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 KIAA0408Q6ZU52 694 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 PHC3Q8NDX5 983 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 CALML6Q8TD86 181 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 DGCR14Q96DF8 476 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 TSPAN17Q96FV3 270 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 OR52B2Q96RD2 323 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 OSMRQ99650 979 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 MRPL57Q9BQC6 102 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 MCMBPQ9BTE3 642 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 EFHD1Q9BUP0 239 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 MRPL1Q9BYD6 325 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 ULBP1Q9BZM6 244 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 WDR41Q9HAD4 459 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 ZBTB26Q9HCK0 441 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 PTTG2Q9NZH5 202 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 SLC45A1Q9Y2W3 748 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 ADM5C9JUS6 153 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 BCAS2O75934 225 aaPredicted RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 CLPTM1O96005 669 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 HSPA1AP0DMV8 641 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 HSPA1BP0DMV9 641 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 CSRP3P50461 194 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 GRM3Q14832 879 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 ARL13AQ5H913 290 aaPredicted RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 GJC2Q5T442 439 aaPredicted RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 KLC3Q6P597 504 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 PKN3Q6P5Z2 889 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 UGT2A3Q6UWM9 527 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 NAPRTQ6XQN6 538 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 LRRC49Q8IUZ0 686 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 OPTNQ96CV9 577 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 MFSD3Q96ES6 412 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 CDRT15Q96T59 188 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 AGAP2Q99490 1192 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 HAUS8Q9BT25 410 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 MLPHQ9BV36 600 aaPredicted RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 MAGEB5Q9BZ81 275 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 WDCPQ9H6R7 721 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 WDR6Q9NNW5 1121 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 ENTPD7Q9NQZ7 604 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 MAN1C1Q9NR34 630 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 RUVBL2Q9Y230 463 aaKnown RBP6.89□□□□□ -1.31
NKRF-204ENST00000542113 NR2E3Q9Y5X4 410 aa6.89□□□□□ -1.31
NKRF-204ENST00000542113 MBLAC1A4D2B0 266 aaPredicted RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 NEMP1O14524 444 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 GABRDO14764 452 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 SPTLC1O15269 473 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 FGF10O15520 208 aaPredicted RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 USP12O75317 370 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 AP1G2O75843 785 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 NCAM1P13591 858 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 ATP5F1P24539 256 aaPredicted RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 CCNCP24863 283 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 PCSK1P29120 753 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 CD151P48509 253 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 NAGLUP54802 743 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 IRF9Q00978 393 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 POU4F1Q01851 419 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 DLG1Q12959 904 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 ZNF423Q2M1K9 1284 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 FAM83EQ2M2I3 478 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 CERCAMQ5T4B2 595 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 TIGD7Q6NT04 549 aaPredicted RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 DPP9Q86TI2 863 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 OSTM1Q86WC4 334 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 ATPAF2Q8N5M1 289 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 SMARCD1Q96GM5 515 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 TBL1YQ9BQ87 522 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 LPIN3Q9BQK8 851 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 COLEC11Q9BWP8 271 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 ZNF385DQ9H6B1 395 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 ZNF696Q9H7X3 374 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 CAB39LQ9H9S4 337 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 SUCOQ9UBS9 1254 aaKnown RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 HES2Q9Y543 173 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 MCM3APO60318 1980 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 KLHL33A6NCF5 533 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 ANKRD33BA6NCL7 494 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 TK2O00142 265 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 CACNG3O60359 315 aa6.88□□□□□ -1.31
NKRF-204ENST00000542113 ENO3P13929 434 aaPredicted RBP6.88□□□□□ -1.31
NKRF-204ENST00000542113 YBX3P16989 372 aaKnown RBP eCLIP6.88□□□□□ -1.31
NKRF-204ENST00000542113 PAX3P23760 479 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms