RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TRIML2Q8N7C3 387 aa15.58■□□□□ 0.08
CNOT9-208ENST00000542068 TMIGD2Q96BF3 282 aa15.58■□□□□ 0.08
CNOT9-208ENST00000542068 ZNF512Q96ME7 567 aaPredicted RBP15.58■□□□□ 0.08
CNOT9-208ENST00000542068 PRICKLE1Q96MT3 831 aaPredicted RBP15.58■□□□□ 0.08
CNOT9-208ENST00000542068 KLHL32Q96NJ5 620 aa15.58■□□□□ 0.08
CNOT9-208ENST00000542068 RGSL1A5PLK6 1076 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 INCA1Q0VD86 236 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 GPR162Q16538 588 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 TMEM110Q86TL2 294 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 ANKRD52Q8NB46 1076 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 RBBP8Q99708 897 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 CPNE1Q99829 537 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 VTA1Q9NP79 307 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 KCNU1A8MYU2 1149 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 MAGEB3O15480 346 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 ZBTB24O43167 697 aaPredicted RBP15.57■□□□□ 0.08
CNOT9-208ENST00000542068 ALDH1A2O94788 518 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 NR2C2P49116 596 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 CTBP1Q13363 440 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 STEAP4Q687X5 459 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 C16orf89Q6UX73 402 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 B3GNT6Q6ZMB0 384 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 KCNMB4Q86W47 210 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 MYO1HQ8N1T3 1032 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 NPLOC4Q8TAT6 608 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 DIS3LQ8TF46 1054 aaKnown RBP15.57■□□□□ 0.08
CNOT9-208ENST00000542068 VPS39Q96JC1 886 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 GAD1Q99259 594 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 SIKE1Q9BRV8 207 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 ULBP1Q9BZM6 244 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 ATXN3LQ9H3M9 355 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 IL1RL2Q9HB29 575 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 GMPR2Q9P2T1 348 aaKnown RBP15.57■□□□□ 0.08
CNOT9-208ENST00000542068 SNX13Q9Y5W8 968 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 RLFQ13129 1914 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 MGAMO43451 1857 aa15.57■□□□□ 0.08
CNOT9-208ENST00000542068 SMIM31A0A1B0GVY4 71 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 SEC24DO94855 1032 aaPredicted RBP15.56■□□□□ 0.08
CNOT9-208ENST00000542068 NMBRP28336 390 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 CDH15P55291 814 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 ADGRE1Q14246 886 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 DCAF4L1Q3SXM0 396 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 GRTP1Q5TC63 336 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 IL23RQ5VWK5 629 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 B3GALNT2Q8NCR0 500 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 SNX27Q96L92 541 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 TPST1O60507 370 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 RNASEH2AO75792 299 aaKnown RBP15.56■□□□□ 0.08
CNOT9-208ENST00000542068 FAM58BPP0C7Q3 252 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 ETFBP38117 255 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 RPL14P50914 215 aaKnown RBP15.56■□□□□ 0.08
CNOT9-208ENST00000542068 TPI1P60174 286 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 CDK18Q07002 472 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 CCDC153Q494R4 210 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 MAML3Q96JK9 1138 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 TNIP3Q96KP6 325 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 STN1Q9H668 368 aaKnown RBP15.56■□□□□ 0.08
CNOT9-208ENST00000542068 LRRC40Q9H9A6 602 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 LMCD1Q9NZU5 365 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 CDYLQ9Y232 598 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 PSME4Q14997 1843 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 DPYSL4O14531 572 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 HDAC3O15379 428 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 FOXD2O60548 495 aaPredicted RBP15.56■□□□□ 0.08
CNOT9-208ENST00000542068 GRM2Q14416 872 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 CCL14Q16627 93 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 TLK2Q86UE8 772 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 NCSTNQ92542 709 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 CCT7Q99832 543 aa15.56■□□□□ 0.08
CNOT9-208ENST00000542068 C9JVG2 144 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 DFFAO00273 331 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 ATP5BP06576 529 aaKnown RBP15.55■□□□□ 0.08
CNOT9-208ENST00000542068 ME2P23368 584 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 RGS2P41220 211 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 LIMK2P53671 638 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 PTK2BQ14289 1009 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 POU6F1Q14863 301 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 DUSP28Q4G0W2 176 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 DENND6AQ8IWF6 608 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 PDCD6IPQ8WUM4 868 aaKnown RBP15.55■□□□□ 0.08
CNOT9-208ENST00000542068 LRTOMTQ8WZ04 291 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 SLC39A3Q9BRY0 314 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 ABHD16BQ9H3Z7 469 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 FAM96AQ9H5X1 160 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 CCDC167Q9P0B6 97 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 KCNH4Q9UQ05 1017 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 TLL2Q9Y6L7 1015 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 ANKRD12Q6UB98 2062 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 PTPRFP10586 1907 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 JCHAINP01591 159 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 PDAP1Q13442 181 aaKnown RBP15.55■□□□□ 0.08
CNOT9-208ENST00000542068 ZNF792Q3KQV3 632 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 OSTM1Q86WC4 334 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 BRI3BPQ8WY22 251 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 ZNF560Q96MR9 790 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 C6orf203Q9P0P8 240 aaPredicted RBP15.55■□□□□ 0.08
CNOT9-208ENST00000542068 STAP1Q9ULZ2 295 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 ATP6AP2A0A1C7CYW4 349 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 ATP6AP2O75787 350 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 VAPBO95292 243 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms