RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 COL1A2P08123 1366 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 PTGESO14684 152 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 ZBED1O96006 694 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 ITGB1P05556 798 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 CHRNGP07510 517 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 HOXD10P28358 340 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 NDST1P52848 882 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 CRYBB1P53674 252 aaPredicted RBP9.3□□□□□ -0.92
THBS3-211ENST00000541990 ABCE1P61221 599 aaKnown RBP9.3□□□□□ -0.92
THBS3-211ENST00000541990 RPL26P61254 145 aaKnown RBP9.3□□□□□ -0.92
THBS3-211ENST00000541990 OLIG2Q13516 323 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 ZNF423Q2M1K9 1284 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 TCTN1Q2MV58 587 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 KCTD21Q4G0X4 260 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 RARS2Q5T160 578 aaKnown RBP9.3□□□□□ -0.92
THBS3-211ENST00000541990 FAM117BQ6P1L5 589 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 SPNS2Q8IVW8 549 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 EXOC8Q8IYI6 725 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 DSELQ8IZU8 1212 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 C3orf58Q8NDZ4 430 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 RCN3Q96D15 328 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 B3GALT6Q96L58 329 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 EBNA1BP2Q99848 306 aaKnown RBP9.3□□□□□ -0.92
THBS3-211ENST00000541990 DCUN1D5Q9BTE7 237 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 YIPF2Q9BWQ6 316 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 NIF3L1Q9GZT8 377 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 PAK5Q9P286 719 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 STK39Q9UEW8 545 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 EBF1Q9UH73 591 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 M0QZ92 97 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 CLDN5O00501 218 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 JUNP05412 331 aaKnown RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 ENO3P13929 434 aaPredicted RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 PIK3R1P27986 724 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 CDH5P33151 784 aaPredicted RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 DLG2Q15700 870 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 FAM187BQ17R55 369 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 USP41Q3LFD5 358 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 BSPRYQ5W0U4 402 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 ITPRIPL1Q6GPH6 555 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 LPCAT2Q7L5N7 544 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 RTN4RL1Q86UN2 441 aaPredicted RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 ZBTB8BQ8NAP8 495 aaPredicted RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 OR6B3Q8NGW1 331 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 FAM110BQ8TC76 370 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 ERLEC1Q96DZ1 483 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 KCNK16Q96T55 309 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 CEP41Q9BYV8 373 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 RHOBTB2Q9BYZ6 727 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 FRMD8P1Q9BZ68 369 aaPredicted RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 COPG2Q9UBF2 871 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 RSL24D1Q9UHA3 163 aaKnown RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 MFHAS1Q9Y4C4 1052 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 SPTBN5Q9NRC6 3674 aaKnown RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 TMEM221A6NGB7 291 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 TRDMT1O14717 391 aaKnown RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 LTFP02788 710 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 RALBP11234 206 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 CYP3A5P20815 502 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 MPSTP25325 297 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 MAGEA3P43357 314 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 CLCNKBP51801 687 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 NR1H2P55055 460 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 NAA20P61599 178 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 IRF9Q00978 393 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 TAP1Q03518 808 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 MPP3Q13368 585 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 C16orf72Q14CZ0 275 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 FAM102AQ5T9C2 384 aaPredicted RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 CASC4Q6P4E1 433 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 POTEHQ6S545 545 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 PACS1Q6VY07 963 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 AGMOQ6ZNB7 445 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 CHERPQ8IWX8 916 aaKnown RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 TMEM102Q8N9M5 508 aaPredicted RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 PCDH19Q8TAB3 1148 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.29□□□□□ -0.92
THBS3-211ENST00000541990 ATP6V1E2Q96A05 226 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 SNX27Q96L92 541 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 CCT7Q99832 543 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 NFKBIZQ9BYH8 718 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 RSAD1Q9HA92 442 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 ANLNQ9NQW6 1124 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 FAM105AQ9NUU6 356 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 MTMR10Q9NXD2 777 aa9.29□□□□□ -0.92
THBS3-211ENST00000541990 NT5C1B-RDH14C9J2C7 533 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 ATP5BP06576 529 aaKnown RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 CKBP12277 381 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 CCDC130P13994 396 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 ALOX15P16050 662 aaPredicted RBP9.28□□□□□ -0.92
THBS3-211ENST00000541990 ADORA2BP29275 332 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 GRM5P41594 1212 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 BRCC3P46736 316 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 GBE1Q04446 702 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 PIGGQ5H8A4 983 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 IL23RQ5VWK5 629 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 SLC9A4Q6AI14 798 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 SCYL2Q6P3W7 929 aa9.28□□□□□ -0.92
THBS3-211ENST00000541990 EPGNQ6UW88 154 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms