RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 PRDM16Q9HAZ2 1276 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 SEMA4BQ9NPR2 832 aaPredicted RBP10.87□□□□□ -0.67
GABRB3-204ENST00000541819 GSAPA4D1B5 854 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 H3BNH8 94 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 SCN2BO60939 215 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 CCDC166P0CW27 439 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 NR2F1P10589 423 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 MAPTP10636 758 aaKnown RBP10.87□□□□□ -0.67
GABRB3-204ENST00000541819 AMPD1P23109 780 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 IGFALSP35858 605 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 ELK3P41970 407 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 STARP49675 285 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 BCAP31P51572 246 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 UGT2B15P54855 530 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 PTGES3Q15185 160 aaKnown RBP10.87□□□□□ -0.67
GABRB3-204ENST00000541819 LY6KQ17RY6 165 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 TMEM199Q8N511 208 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 NOA1Q8NC60 698 aaKnown RBP10.87□□□□□ -0.67
GABRB3-204ENST00000541819 ZSWIM2Q8NEG5 633 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 SPATA20Q8TB22 786 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 SLC4A9Q96Q91 983 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 VPS35Q96QK1 796 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 ABCG4Q9H172 646 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 POPDC2Q9HBU9 364 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 RASSF1Q9NS23 344 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 MAGEC1O60732 1142 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 BMP7P18075 431 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 ACTR3P61158 418 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 PFKPQ01813 784 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 HPS6Q86YV9 775 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 NKAPQ8N5F7 415 aaKnown RBP10.87□□□□□ -0.67
GABRB3-204ENST00000541819 HAVCR1Q96D42 359 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 FERD3LQ96RJ6 166 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 BTBD10Q9BSF8 475 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 CDADC1Q9BWV3 514 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 RHOBTB2Q9BYZ6 727 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 TKTL2Q9H0I9 626 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 KCNF1Q9H3M0 494 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 ASAH2Q9NR71 780 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 GIT1Q9Y2X7 761 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 GPC6Q9Y625 555 aaPredicted RBP10.87□□□□□ -0.67
GABRB3-204ENST00000541819 A0A0B4J269 797 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 FAM92AA1XBS5 289 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 CSF1RP07333 972 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 FAM228BP0C875 321 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 ATP5C1P36542 298 aaKnown RBP10.87□□□□□ -0.67
GABRB3-204ENST00000541819 NAA20P61599 178 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 OR10H5Q8NGA6 315 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 MYCBPAPQ8TBZ2 947 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 IPCEF1Q8WWN9 437 aaPredicted RBP10.87□□□□□ -0.67
GABRB3-204ENST00000541819 MYDGFQ969H8 173 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 ZNF558Q96NG5 402 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 SLC4A5Q9BY07 1137 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 SPATC1LQ9H0A9 340 aa10.87□□□□□ -0.67
GABRB3-204ENST00000541819 SLC28A1O00337 649 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 LIN7AO14910 233 aaPredicted RBP10.86□□□□□ -0.67
GABRB3-204ENST00000541819 NTSR2O95665 410 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 ADSLP30566 484 aaPredicted RBP10.86□□□□□ -0.67
GABRB3-204ENST00000541819 ATP13A4Q4VNC1 1196 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 FAM46CQ5VWP2 391 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 ZNF549Q6P9A3 640 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 CYP2R1Q6VVX0 501 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 C3orf67Q6ZVT6 689 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 OFCC1Q8IZS5 231 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 RP9Q8TA86 221 aaKnown RBP10.86□□□□□ -0.67
GABRB3-204ENST00000541819 MAML3Q96JK9 1138 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 CCDC167Q9P0B6 97 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 TBC1D30Q9Y2I9 924 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 TRIM17Q9Y577 477 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 PCDHB9Q9Y5E1 797 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 ZNF780BQ9Y6R6 833 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 TCEA3O75764 348 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 SLC6A3Q01959 620 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 NR1D2Q14995 579 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 DEFB106AQ8N104 65 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 AADATQ8N5Z0 425 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 ACTL9Q8TC94 416 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 ACER1Q8TDN7 264 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 CDH9Q9ULB4 789 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 SLC27A6Q9Y2P4 619 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 USP42Q9H9J4 1324 aaKnown RBP10.86□□□□□ -0.67
GABRB3-204ENST00000541819 GIMD1P0DJR0 217 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 LRPAP1P30533 357 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 CORO7P57737 925 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 DMPKQ09013 629 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 SUZ12Q15022 739 aaKnown RBP10.86□□□□□ -0.67
GABRB3-204ENST00000541819 AFTPHQ6ULP2 937 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 MCOLN2Q8IZK6 566 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 FBXO30Q8TB52 745 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 ASB7Q9H672 318 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 NECTIN3Q9NQS3 549 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 DNMT3LQ9UJW3 386 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 ABCA8O94911 1581 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 GAKO14976 1311 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 LOC100506127A0A0U1RQW1 187 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 CCDC182A6NF36 153 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 CHP2O43745 196 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 SCGNO76038 276 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 TGFB3P10600 412 aa10.86□□□□□ -0.67
GABRB3-204ENST00000541819 CACNA2D1P54289 1103 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms