RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 FAHP16930 419 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 PTGS1P23219 599 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 GPTP24298 496 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 MAGEA8P43361 318 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 SLC15A1P46059 708 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 RABIFP47224 123 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 KHKP50053 298 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 ACTR1AP61163 376 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 NOMO3P69849 1222 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 ADAM17P78536 824 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 CCDC15Q0P6D6 951 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 SF3A3Q12874 501 aaKnown RBP eCLIP5.72□□□□□ -1.49
DDB1-219ENST00000541513 TMEM115Q12893 351 aaPredicted RBP5.72□□□□□ -1.49
DDB1-219ENST00000541513 INSCQ1MX18 579 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 C15orf59Q2T9L4 293 aaPredicted RBP5.72□□□□□ -1.49
DDB1-219ENST00000541513 HFEQ30201 348 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 CCDC40Q4G0X9 1142 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 SLC39A12Q504Y0 691 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 BOLA3Q53S33 107 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 BEND3Q5T5X7 828 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 ANKRD34AQ69YU3 496 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 ABLIM2Q6H8Q1 611 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 ANGPTL8Q6UXH0 198 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 ABHD15Q6UXT9 468 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 TRABD2AQ86V40 505 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 TAX1BP1Q86VP1 789 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 GAS2L3Q86XJ1 694 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 CEP57Q86XR8 500 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 DZIP1Q86YF9 867 aaKnown RBP5.72□□□□□ -1.49
DDB1-219ENST00000541513 SIX6OS1Q8N1H7 587 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 FSIP1Q8NA03 581 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 CNBD1Q8NA66 436 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 CCDC148Q8NFR7 591 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 RFWD2Q8NHY2 731 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 NEK9Q8TD19 979 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 RNF139Q8WU17 664 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 HMGB4Q8WW32 186 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 GRAMD1AQ96CP6 724 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 ALG14Q96F25 216 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 PRR11Q96HE9 360 aaPredicted RBP5.72□□□□□ -1.49
DDB1-219ENST00000541513 RBM17Q96I25 401 aaKnown RBP5.72□□□□□ -1.49
DDB1-219ENST00000541513 SH3GL2Q99962 352 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 TCF25Q9BQ70 676 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 TBCDQ9BTW9 1192 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 UTP14AQ9BVJ6 771 aaKnown RBP5.72□□□□□ -1.49
DDB1-219ENST00000541513 DUSP23Q9BVJ7 150 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 AMNQ9BXJ7 453 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 TRIM7Q9C029 511 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 TSPYL1Q9H0U9 437 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 ISCUQ9H1K1 167 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 SYNPO2LQ9H987 977 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 LIN7CQ9NUP9 197 aaKnown RBP5.72□□□□□ -1.49
DDB1-219ENST00000541513 POLR3BQ9NW08 1133 aaPredicted RBP5.72□□□□□ -1.49
DDB1-219ENST00000541513 WSB2Q9NYS7 404 aaPredicted RBP5.72□□□□□ -1.49
DDB1-219ENST00000541513 TRPS1Q9UHF7 1281 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 CDH7Q9ULB5 785 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 PADI1Q9ULC6 663 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 WDR37Q9Y2I8 494 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 ADAM18Q9Y3Q7 739 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 PCDHB4Q9Y5E5 795 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 NFS1Q9Y697 457 aa5.72□□□□□ -1.49
DDB1-219ENST00000541513 TAF1P21675 1872 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 CCDC187A0A096LP49 1063 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 FAM237BA0A1B0GVD1 139 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 SLC9B1P1A6NJY1 282 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 GPR89AB7ZAQ6 455 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 MYO1CO00159 1063 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 VWA5AO00534 786 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 CTDSP2O14595 271 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 ANGPT2O15123 496 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 CCNT2O60583 730 aaKnown RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 FKTNO75072 461 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 LETM1O95202 739 aaPredicted RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 LY86O95711 162 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 ONECUT2O95948 504 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 PCCAP05165 728 aaPredicted RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 ALPPP05187 535 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 C1SP09871 688 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 GPR89BP0CG08 455 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 PRR35P0CG20 571 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 ALPPL2P10696 532 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 SRCP12931 536 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 PRKCHP24723 683 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 APEX1P27695 318 aaKnown RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 PCSK1P29120 753 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 MSX2P35548 267 aaPredicted RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 PBX3P40426 434 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 PNPLA4P41247 253 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 CCR10P46092 362 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 ATP5OP48047 213 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 CAMLGP49069 296 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 STAT2P52630 851 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 CASP9P55211 416 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 PER3P56645 1201 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 INHBEP58166 350 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 STX1BP61266 288 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 YBX1P67809 324 aaKnown RBP5.71□□□□□ -1.5
DDB1-219ENST00000541513 OLR1P78380 273 aa5.71□□□□□ -1.5
DDB1-219ENST00000541513 BEX3Q00994 111 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms