RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 CCDC127Q96BQ5 260 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 HDAC11Q96DB2 347 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 RPL10LQ96L21 214 aaKnown RBP9.71□□□□□ -0.86
YBX3-211ENST00000541351 NT5C1AQ9BXI3 368 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 DUSP16Q9BY84 665 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 SLC17A9Q9BYT1 436 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 UBXN6Q9BZV1 441 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 XYLT2Q9H1B5 865 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 IKZF4Q9H2S9 585 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.71□□□□□ -0.86
YBX3-211ENST00000541351 ERRFI1Q9UJM3 462 aaPredicted RBP9.71□□□□□ -0.86
YBX3-211ENST00000541351 ITGB1BP2Q9UKP3 347 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 INTS6Q9UL03 887 aaKnown RBP9.71□□□□□ -0.86
YBX3-211ENST00000541351 NAALADL1Q9UQQ1 740 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 POLHQ9Y253 713 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 RNF215Q9Y6U7 377 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 MED13LQ71F56 2210 aa9.71□□□□□ -0.86
YBX3-211ENST00000541351 KPNA3O00505 521 aaPredicted RBP9.7□□□□□ -0.86
YBX3-211ENST00000541351 ACSL4O60488 711 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 FAM155BO75949 473 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 LUC7L3O95232 432 aaKnown RBP9.7□□□□□ -0.86
YBX3-211ENST00000541351 CPNE6O95741 557 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 ZBED1O96006 694 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 PRNPP04156 253 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 CSTF2P33240 577 aaKnown RBP eCLIP9.7□□□□□ -0.86
YBX3-211ENST00000541351 PPARDQ03181 441 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 TRA2AQ13595 282 aaKnown RBP eCLIP9.7□□□□□ -0.86
YBX3-211ENST00000541351 SGSM1Q2NKQ1 1148 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 PIP5KL1Q5T9C9 394 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 C16orf46Q6P387 395 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 RFWD3Q6PCD5 774 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 KDELC2Q7Z4H8 507 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 AGBL5Q8NDL9 886 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 PDCD6IPQ8WUM4 868 aaKnown RBP9.7□□□□□ -0.86
YBX3-211ENST00000541351 LMLNQ96KR4 655 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 BMFQ96LC9 184 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 IPO9Q96P70 1041 aaKnown RBP9.7□□□□□ -0.86
YBX3-211ENST00000541351 LENG8Q96PV6 779 aaPredicted RBP9.7□□□□□ -0.86
YBX3-211ENST00000541351 LRRC61Q9BV99 259 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 IMPG2Q9BZV3 1241 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 CYP4F12Q9HCS2 524 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 ABCC13Q9NSE7 274 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 BLOC1S4Q9NUP1 217 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 FAM13BQ9NYF5 915 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 SIRPGQ9P1W8 387 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 MAP10Q9P2G4 905 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 GPR34Q9UPC5 381 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 KCNMB2Q9Y691 235 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 SCN8AQ9UQD0 1980 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 HIVEP3Q5T1R4 2406 aa9.7□□□□□ -0.86
YBX3-211ENST00000541351 HIVEP1P15822 2718 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 POM121BA6NF01 834 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 TCP11X1B4DZS4 312 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 GCATO75600 419 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 RPN1P04843 607 aaKnown RBP9.69□□□□□ -0.86
YBX3-211ENST00000541351 TSHRP16473 764 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 OAS2P29728 719 aaKnown RBP9.69□□□□□ -0.86
YBX3-211ENST00000541351 PTGER4P35408 488 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 CTSOP43234 321 aaPredicted RBP9.69□□□□□ -0.86
YBX3-211ENST00000541351 TOB1P50616 345 aaPredicted RBP9.69□□□□□ -0.86
YBX3-211ENST00000541351 TAS2R38P59533 333 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 SNRPFP62306 86 aaKnown RBP9.69□□□□□ -0.86
YBX3-211ENST00000541351 YPEL5P62699 121 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 ABHD18Q0P651 414 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 C1orf61Q13536 156 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 NCOA4Q13772 614 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 ME3Q16798 604 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 TMEM259Q4ZIN3 620 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 EFHC2Q5JST6 749 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 PPP1R26Q5T8A7 1209 aaPredicted RBP9.69□□□□□ -0.86
YBX3-211ENST00000541351 HPS6Q86YV9 775 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 SLITRK4Q8IW52 837 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 KYQ8NBH2 561 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 ATL2Q8NHH9 583 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 LLPHQ9BRT6 129 aaKnown RBP9.69□□□□□ -0.86
YBX3-211ENST00000541351 ZPBPQ9BS86 351 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 C1QTNF7Q9BXJ2 289 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 UNKQ9C0B0 810 aaKnown RBP9.69□□□□□ -0.86
YBX3-211ENST00000541351 SLAMF7Q9NQ25 335 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 LATS2Q9NRM7 1088 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 TBC1D7Q9P0N9 293 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 STK17AQ9UEE5 414 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 CCDC39Q9UFE4 941 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 KLF15Q9UIH9 416 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 SARDHQ9UL12 918 aa9.69□□□□□ -0.86
YBX3-211ENST00000541351 G3BP2Q9UN86 482 aaKnown RBP9.69□□□□□ -0.86
YBX3-211ENST00000541351 DUX1O43812 170 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 ATP9BO43861 1147 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 PAK4O96013 591 aaPredicted RBP9.68□□□□□ -0.86
YBX3-211ENST00000541351 PRF1P14222 555 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 NR1D1P20393 614 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 ITGA3P26006 1051 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 SGSHP51688 502 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 TKTL1P51854 596 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 PGDP52209 483 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 CYP24A1Q07973 514 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 EIF2B5Q13144 721 aaKnown RBP9.68□□□□□ -0.86
YBX3-211ENST00000541351 INPP5JQ15735 1006 aaPredicted RBP9.68□□□□□ -0.86
YBX3-211ENST00000541351 MACC1Q6ZN28 852 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 ERN2Q76MJ5 926 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms