RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ZNF560Q96MR9 790 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 PGLYRP2Q96PD5 576 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 PCYT2Q99447 389 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 RTKNQ9BST9 563 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 HAPLN2Q9GZV7 340 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 TMEM39AQ9NV64 488 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 CNTN6Q9UQ52 1028 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 PPP2R3BQ9Y5P8 575 aa5.32□□□□□ -1.56
PROM1-220ENST00000540805 A0A087WZ62 844 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 KANSL1LA0AUZ9 987 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 FUOMA2VDF0 154 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 E9PBE3 544 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 GLRA3O75311 464 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 LRCH4O75427 683 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 FBXO21O94952 628 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 TOP3BO95985 862 aaKnown RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 FGF3P11487 239 aaPredicted RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 PSMC3P17980 439 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 CD247P20963 164 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 GJA5P36382 358 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 WNT7BP56706 349 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 SESN2P58004 480 aaPredicted RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 TWF1Q12792 350 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 FLOT2Q14254 428 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 ZNF235Q14590 738 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 N4BP2L1Q5TBK1 243 aaPredicted RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 IL31Q6EBC2 164 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 C16orf89Q6UX73 402 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 ABHD15Q6UXT9 468 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 LPCAT2Q7L5N7 544 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 RSPH1Q8WYR4 309 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 VPS39Q96JC1 886 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 CCT7Q99832 543 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 FDXACB1Q9BRP7 624 aaPredicted RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 NTPCRQ9BSD7 190 aaKnown RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 NUF2Q9BZD4 464 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 DRC3Q9H069 523 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 COPS7BQ9H9Q2 264 aaPredicted RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 PLGRKTQ9HBL7 147 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 NMRK2Q9NPI5 230 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 AASDHPPTQ9NRN7 309 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 NDFIP2Q9NV92 336 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 PNPOQ9NVS9 261 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 SMPD4Q9NXE4 827 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 STK39Q9UEW8 545 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 BAG5Q9UL15 447 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 PRPF19Q9UMS4 504 aaKnown RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 FAM32AQ9Y421 112 aaKnown RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 PCDHB7Q9Y5E2 793 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 NUMA1Q14980 2115 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 A0A0G2JLL6 359 aaPredicted RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 CASTOR2A6NHX0 329 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 ZBTB42B2RXF5 422 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 SPATA31C2B4DYI2 1134 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 DCXO43602 365 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 ALDH1A1P00352 501 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 KRT3P12035 628 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 ZFXP17010 805 aaPredicted RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 ADORA2AP29274 412 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 ETFBP38117 255 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 ADCYAP1R1P41586 468 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 GRM5P41594 1212 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 CPT1AP50416 773 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 CDK9P50750 372 aaKnown RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 CSE1LP55060 971 aaKnown RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 CLDN10P78369 228 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 PRAMEP78395 509 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 NOMO1Q15155 1222 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 TAZQ16635 292 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 EML3Q32P44 896 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 GPAT2Q6NUI2 795 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 C16orf46Q6P387 395 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 NPNTQ6UXI9 565 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 PRRT2Q7Z6L0 340 aaPredicted RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 ADGRF2Q8IZF7 708 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 CCNYL1Q8N7R7 359 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 DNAJB3Q8WWF6 145 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 ZNF518BQ9C0D4 1074 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 KLC2Q9H0B6 622 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 HMX1Q9NP08 348 aaPredicted RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 XPNPEP3Q9NQH7 507 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 CYP26B1Q9NR63 512 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 SLC38A7Q9NVC3 462 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 EBF1Q9UH73 591 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 RIMS3Q9UJD0 308 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 NCOR1O75376 2440 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 C17orf102A2RUQ5 167 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 CYBBP04839 570 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 ITGB3P05106 788 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 SERPIND1P05546 499 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 INSRRP14616 1297 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 ZNF23P17027 643 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 GRK2P25098 689 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 CNTFP26441 200 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 RFC1P35251 1148 aaPredicted RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 GARSP41250 739 aaKnown RBP5.31□□□□□ -1.56
PROM1-220ENST00000540805 NUDT2P50583 147 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 ZNF132P52740 706 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 ST8SIA6P61647 398 aa5.31□□□□□ -1.56
PROM1-220ENST00000540805 KLF10Q13118 480 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms