RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 BRD3Q15059 726 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 SHBQ15464 509 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 HLFQ16534 295 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 AP5B1Q2VPB7 878 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 ZNF284Q2VY69 593 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 CCDC38Q502W7 563 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 TTC22Q5TAA0 569 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 DGAT2L7PQ6IED9 249 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 LIN54Q6MZP7 749 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 PRSS57Q6UWY2 283 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 CREB3L2Q70SY1 520 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 MON1BQ7L1V2 547 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 RASGRP2Q7LDG7 609 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 WDR5BQ86VZ2 330 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 BRSK2Q8IWQ3 736 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 SCAIQ8N9R8 606 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 BICD2Q8TD16 824 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 SLC2A12Q8TD20 617 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 ATOH1Q92858 354 aaPredicted RBP3.91□□□□□ -1.78
MDM2-227ENST00000540709 LTV1Q96GA3 475 aaPredicted RBP3.91□□□□□ -1.78
MDM2-227ENST00000540709 KLHL31Q9H511 634 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 PLEKHA2Q9HB19 425 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 THAP1Q9NVV9 213 aa3.91□□□□□ -1.78
MDM2-227ENST00000540709 SRPRBQ9Y5M8 271 aaKnown RBP3.91□□□□□ -1.78
MDM2-227ENST00000540709 ABHD14A-ACY1A0A1B0GW23 586 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 LINC01553A4QN01 128 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 KDM4EB2RXH2 506 aaPredicted RBP3.9□□□□□ -1.79
MDM2-227ENST00000540709 H0Y3Z8 333 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 KCNJ13O60928 360 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 DDAH2O95865 285 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 FCGR1AP12314 374 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 ACP5P13686 325 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 DPP6P42658 865 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 GAS1P54826 345 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 HYAL1Q12794 435 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 HDAC1Q13547 482 aaPredicted RBP3.9□□□□□ -1.79
MDM2-227ENST00000540709 DCTN1Q14203 1278 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 RINLQ6ZS11 566 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 RBM23Q86U06 439 aaKnown RBP3.9□□□□□ -1.79
MDM2-227ENST00000540709 SERPINA11Q86U17 422 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 ABHD16BQ9H3Z7 469 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 UPB1Q9UBR1 384 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 ICAM5Q9UMF0 924 aa3.9□□□□□ -1.79
MDM2-227ENST00000540709 TRIP12Q14669 1992 aaPredicted RBP3.89□□□□□ -1.79
MDM2-227ENST00000540709 PLSCR5A0PG75 271 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 DENND3A2RUS2 1198 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 BTBD18B2RXH4 712 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 RNMTO43148 476 aaKnown RBP3.89□□□□□ -1.79
MDM2-227ENST00000540709 SEPT4O43236 478 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 IL1AP01583 271 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 TFRCP02786 760 aaKnown RBP3.89□□□□□ -1.79
MDM2-227ENST00000540709 CSTBP04080 98 aaKnown RBP3.89□□□□□ -1.79
MDM2-227ENST00000540709 CDK7P50613 346 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 TRAF2Q12933 501 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 PKP1Q13835 747 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 BLMHQ13867 455 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 TOGARAM2Q6ZUX3 1019 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 GALNT7Q86SF2 657 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 TRIM74Q86UV6 250 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 TRIM73Q86UV7 250 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 PTGR2Q8N8N7 351 aaPredicted RBP3.89□□□□□ -1.79
MDM2-227ENST00000540709 POF1BQ8WVV4 589 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 RETREG1Q9H6L5 497 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 CHODLQ9H9P2 273 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 PLCB1Q9NQ66 1216 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 TMLHEQ9NVH6 421 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 IL36RNQ9UBH0 155 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 SEL1LQ9UBV2 794 aa3.89□□□□□ -1.79
MDM2-227ENST00000540709 MST1RQ04912 1400 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 SERPINI2O75830 405 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 CLDN7O95471 211 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 MYZAPP0CAP1 466 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 CKMT1AP12532 417 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 C21orf33P30042 268 aaPredicted RBP3.88□□□□□ -1.79
MDM2-227ENST00000540709 PRKAA2P54646 552 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 ARHGAP8P85298 464 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 CHAF1AQ13111 956 aaPredicted RBP3.88□□□□□ -1.79
MDM2-227ENST00000540709 MYBPC2Q14324 1141 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 ZNF628Q5EBL2 1059 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 TYW3Q6IPR3 259 aaKnown RBP3.88□□□□□ -1.79
MDM2-227ENST00000540709 RETSATQ6NUM9 610 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 AADACL2Q6P093 401 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 CCDC174Q6PII3 467 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 SPSB3Q6PJ21 355 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 H1FNTQ75WM6 255 aaPredicted RBP3.88□□□□□ -1.79
MDM2-227ENST00000540709 ARMC9Q7Z3E5 817 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 CLIP4Q8N3C7 705 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 GALNT15Q8N3T1 639 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 RASSF8Q8NHQ8 419 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 OTUD7AQ8TE49 926 aaPredicted RBP3.88□□□□□ -1.79
MDM2-227ENST00000540709 TBC1D22AQ8WUA7 517 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 DNASE2BQ8WZ79 361 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 RTP4Q96DX8 246 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 RBM17Q96I25 401 aaKnown RBP3.88□□□□□ -1.79
MDM2-227ENST00000540709 TXNDC15Q96J42 360 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 TEFMQ96QE5 360 aaKnown RBP3.88□□□□□ -1.79
MDM2-227ENST00000540709 FRG2BQ96QU4 278 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 SLC22A11Q9NSA0 550 aa3.88□□□□□ -1.79
MDM2-227ENST00000540709 GRHPRQ9UBQ7 328 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms