RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ASNSD1Q9NWL6 643 aa15.33■□□□□ 0.04
USB1-203ENST00000539737 SCML1Q9UN30 329 aa15.33■□□□□ 0.04
USB1-203ENST00000539737 TLR6Q9Y2C9 796 aa15.33■□□□□ 0.04
USB1-203ENST00000539737 ITIH6Q6UXX5 1313 aa15.33■□□□□ 0.04
USB1-203ENST00000539737 COL6A6A6NMZ7 2263 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 A0A1B0GVM2 712 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 A0A1W2PNU3 283 aaPredicted RBP15.32■□□□□ 0.04
USB1-203ENST00000539737 A0A1W2PQJ5 194 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 TARSL2A2RTX5 802 aaKnown RBP15.32■□□□□ 0.04
USB1-203ENST00000539737 LRRC53A6NM62 1247 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 HSF2BPO75031 334 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 NEBLO76041 1014 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 MOCS3O95396 460 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 SRPRAP08240 638 aaKnown RBP15.32■□□□□ 0.04
USB1-203ENST00000539737 GIMD1P0DJR0 217 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 RXRGP48443 463 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 TAS2R38P59533 333 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 DAB2P98082 770 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 FMO1Q01740 532 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 ASIC2Q16515 512 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 TAF1BQ53T94 588 aaPredicted RBP15.32■□□□□ 0.04
USB1-203ENST00000539737 EFHC1Q5JVL4 640 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 NAA35Q5VZE5 725 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 RNF219Q5W0B1 726 aaPredicted RBP15.32■□□□□ 0.04
USB1-203ENST00000539737 CRTC1Q6UUV9 634 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 SKA1Q96BD8 255 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 XPO4Q9C0E2 1151 aaKnown RBP15.32■□□□□ 0.04
USB1-203ENST00000539737 SNX10Q9Y5X0 201 aa15.32■□□□□ 0.04
USB1-203ENST00000539737 ADH1BP00325 375 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 ERBB2P04626 1255 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 CYP1A1P04798 512 aaPredicted RBP15.31■□□□□ 0.04
USB1-203ENST00000539737 CTSLP07711 333 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 C1SP09871 688 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 SLC2A3P11169 496 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 SCNN1AP37088 669 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 YWHAZP63104 245 aaKnown RBP15.31■□□□□ 0.04
USB1-203ENST00000539737 GABREP78334 506 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 CDK17Q00537 523 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 SFSWAPQ12872 951 aaKnown RBP15.31■□□□□ 0.04
USB1-203ENST00000539737 ACCSLQ4AC99 568 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 OR6B2Q6IFH4 312 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 CXorf57Q6NSI4 855 aaKnown RBP15.31■□□□□ 0.04
USB1-203ENST00000539737 OLFML1Q6UWY5 402 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 FAM183BPQ6ZVS7 135 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 SLC26A9Q7LBE3 791 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 PRPF39Q86UA1 669 aaKnown RBP15.31■□□□□ 0.04
USB1-203ENST00000539737 CCAR2Q8N163 923 aaKnown RBP15.31■□□□□ 0.04
USB1-203ENST00000539737 ATP6V0D2Q8N8Y2 350 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 MFSD2AQ8NA29 543 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 ZNF397Q8NF99 534 aaPredicted RBP15.31■□□□□ 0.04
USB1-203ENST00000539737 RNF34Q969K3 372 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 C18orf8Q96DM3 657 aa15.31■□□□□ 0.04
USB1-203ENST00000539737 COL27A1Q8IZC6 1860 aaPredicted RBP15.31■□□□□ 0.04
USB1-203ENST00000539737 LY6G6EA0A0G2JKS1 128 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 K7ERQ8 282 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 TK2O00142 265 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 PLRG1O43660 514 aaKnown RBP15.3■□□□□ 0.04
USB1-203ENST00000539737 RNGTTO60942 597 aaKnown RBP15.3■□□□□ 0.04
USB1-203ENST00000539737 DAB1O75553 588 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 THEGLP0DJG4 465 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 CHRNB2P17787 502 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 DGKAP23743 735 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 ACP1P24666 158 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 ACTN2P35609 894 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 NSFP46459 744 aaKnown RBP15.3■□□□□ 0.04
USB1-203ENST00000539737 GABRB2P47870 512 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 SLC6A3Q01959 620 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 MTA1Q13330 715 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 TRIM14Q14142 442 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 ELAVL3Q14576 367 aaKnown RBP15.3■□□□□ 0.04
USB1-203ENST00000539737 ARID5BQ14865 1188 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 KIAA1614Q5VZ46 1190 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 PPP1R2P3Q6NXS1 205 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 C14orf80Q86SX3 495 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 SLC22A18ASQ8N1D0 253 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 OR13H1Q8NG92 308 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 ARRDC3Q96B67 414 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 BTN2A3PQ96KV6 586 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 SLC2A13Q96QE2 648 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 AGPAT1Q99943 283 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 ANP32EQ9BTT0 268 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 CALN1Q9BXU9 219 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 SEPT11Q9NVA2 429 aaKnown RBP15.3■□□□□ 0.04
USB1-203ENST00000539737 AIPL1Q9NZN9 384 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.3■□□□□ 0.04
USB1-203ENST00000539737 U3KQA8 63 aa15.3■□□□□ 0.04
USB1-203ENST00000539737 A0A1W2PQU0 124 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 USP12O75317 370 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 CSO75390 466 aaKnown RBP15.29■□□□□ 0.04
USB1-203ENST00000539737 GRAP2O75791 330 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 TRUB2O95900 331 aaKnown RBP15.29■□□□□ 0.04
USB1-203ENST00000539737 MT-CO1P00395 513 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 NNMTP40261 264 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 STAT4Q14765 748 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 CLEC16AQ2KHT3 1053 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 SLC45A4Q5BKX6 768 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 SEL1L3Q68CR1 1132 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 CPA5Q8WXQ8 436 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 RFFLQ8WZ73 363 aa15.29■□□□□ 0.04
USB1-203ENST00000539737 ALG14Q96F25 216 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms