RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ILF3Q12906 894 aaKnown RBP eCLIP5.42□□□□□ -1.54
CCDC7-209ENST00000539197 SF3B4Q15427 424 aaKnown RBP eCLIP5.42□□□□□ -1.54
CCDC7-209ENST00000539197 ADGRG7Q96K78 797 aa5.42□□□□□ -1.54
CCDC7-209ENST00000539197 LHPPQ9H008 270 aa5.42□□□□□ -1.54
CCDC7-209ENST00000539197 SEL1LQ9UBV2 794 aa5.42□□□□□ -1.54
CCDC7-209ENST00000539197 KIF26BQ2KJY2 2108 aa5.42□□□□□ -1.54
CCDC7-209ENST00000539197 PRR23AA6NEV1 266 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 RNMTO43148 476 aaKnown RBP5.41□□□□□ -1.54
CCDC7-209ENST00000539197 MMP3P08254 477 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 CLCNKBP51801 687 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 ACSM2AQ08AH3 577 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 TBRG1Q3YBR2 411 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 TRIM60Q495X7 471 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 GATAD2AQ86YP4 633 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 WBP2Q969T9 261 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 CCDC138Q96M89 665 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 FRG2BQ96QU4 278 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 IFT27Q9BW83 186 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 TRIM31Q9BZY9 425 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.41□□□□□ -1.54
CCDC7-209ENST00000539197 GAREM1Q9H706 876 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 ACAD9Q9H845 621 aa5.41□□□□□ -1.54
CCDC7-209ENST00000539197 CYP21A2P08686 494 aa5.4□□□□□ -1.54
CCDC7-209ENST00000539197 GSTM2P28161 218 aa5.4□□□□□ -1.54
CCDC7-209ENST00000539197 RFC1P35251 1148 aaPredicted RBP5.4□□□□□ -1.54
CCDC7-209ENST00000539197 CTTNQ14247 550 aaKnown RBP5.4□□□□□ -1.54
CCDC7-209ENST00000539197 KRTAP5-1Q6L8H4 278 aa5.4□□□□□ -1.54
CCDC7-209ENST00000539197 C11orf96Q7Z7L8 435 aa5.4□□□□□ -1.54
CCDC7-209ENST00000539197 TEX45Q8NA69 505 aa5.4□□□□□ -1.54
CCDC7-209ENST00000539197 GPT2Q8TD30 523 aa5.4□□□□□ -1.54
CCDC7-209ENST00000539197 HDAC7Q8WUI4 952 aa5.4□□□□□ -1.54
CCDC7-209ENST00000539197 FAR1Q8WVX9 515 aa5.4□□□□□ -1.54
CCDC7-209ENST00000539197 EPYCQ99645 322 aa5.4□□□□□ -1.54
CCDC7-209ENST00000539197 SLC22A11Q9NSA0 550 aa5.4□□□□□ -1.54
CCDC7-209ENST00000539197 WDR81Q562E7 1941 aa5.4□□□□□ -1.55
CCDC7-209ENST00000539197 MST1RQ04912 1400 aa5.4□□□□□ -1.55
CCDC7-209ENST00000539197 DDAH2O95865 285 aa5.39□□□□□ -1.55
CCDC7-209ENST00000539197 SNTA1Q13424 505 aa5.39□□□□□ -1.55
CCDC7-209ENST00000539197 ALKBH1Q13686 389 aaKnown RBP5.39□□□□□ -1.55
CCDC7-209ENST00000539197 LRRC24Q50LG9 513 aa5.39□□□□□ -1.55
CCDC7-209ENST00000539197 SERPINA11Q86U17 422 aa5.39□□□□□ -1.55
CCDC7-209ENST00000539197 RSC1A1Q92681 617 aa5.39□□□□□ -1.55
CCDC7-209ENST00000539197 TXNDC15Q96J42 360 aa5.39□□□□□ -1.55
CCDC7-209ENST00000539197 MALT1Q9UDY8 824 aa5.39□□□□□ -1.55
CCDC7-209ENST00000539197 IGLV5-37A0A075B6J1 123 aa5.38□□□□□ -1.55
CCDC7-209ENST00000539197 MXI1P50539 228 aa5.38□□□□□ -1.55
CCDC7-209ENST00000539197 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
CCDC7-209ENST00000539197 ZNF449Q6P9G9 518 aa5.38□□□□□ -1.55
CCDC7-209ENST00000539197 EXOC3L1Q86VI1 746 aa5.38□□□□□ -1.55
CCDC7-209ENST00000539197 SCN4BQ8IWT1 228 aa5.38□□□□□ -1.55
CCDC7-209ENST00000539197 IL17FQ96PD4 163 aa5.38□□□□□ -1.55
CCDC7-209ENST00000539197 CDC23Q9UJX2 597 aa5.38□□□□□ -1.55
CCDC7-209ENST00000539197 DAPP1Q9UN19 280 aa5.38□□□□□ -1.55
CCDC7-209ENST00000539197 OSGIN2Q9Y236 505 aa5.38□□□□□ -1.55
CCDC7-209ENST00000539197 SAA2-SAA4A0A096LPE2 208 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 EFCAB8A8MWE9 144 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 KDM4EB2RXH2 506 aaPredicted RBP5.37□□□□□ -1.55
CCDC7-209ENST00000539197 PEX5P50542 639 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 MYBPHQ13203 477 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 RBM39Q14498 530 aaKnown RBP5.37□□□□□ -1.55
CCDC7-209ENST00000539197 GALNTL6Q49A17 601 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 GXYLT1Q4G148 440 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 CEP85LQ5SZL2 805 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 TMEM268Q5VZI3 342 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 GGT6Q6P531 493 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 KSR2Q6VAB6 950 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 WDR5BQ86VZ2 330 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 SYTL1Q8IYJ3 562 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 ANKRD13AQ8IZ07 590 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 POC1AQ8NBT0 407 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 TMEM18Q96B42 140 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 ARRDC3Q96B67 414 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 UPB1Q9UBR1 384 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 PHTF1Q9UMS5 762 aa5.37□□□□□ -1.55
CCDC7-209ENST00000539197 TARSL2A2RTX5 802 aaKnown RBP5.36□□□□□ -1.55
CCDC7-209ENST00000539197 AVPR2P30518 371 aa5.36□□□□□ -1.55
CCDC7-209ENST00000539197 TBC1D9BQ66K14 1250 aa5.36□□□□□ -1.55
CCDC7-209ENST00000539197 IL31Q6EBC2 164 aa5.36□□□□□ -1.55
CCDC7-209ENST00000539197 PATL1Q86TB9 770 aaKnown RBP5.36□□□□□ -1.55
CCDC7-209ENST00000539197 DCUN1D3Q8IWE4 304 aa5.36□□□□□ -1.55
CCDC7-209ENST00000539197 LMNTD1Q8N9Z9 388 aa5.36□□□□□ -1.55
CCDC7-209ENST00000539197 CADM1Q9BY67 442 aaKnown RBP5.36□□□□□ -1.55
CCDC7-209ENST00000539197 NPFFR1Q9GZQ6 430 aa5.36□□□□□ -1.55
CCDC7-209ENST00000539197 CLPBQ9H078 707 aa5.36□□□□□ -1.55
CCDC7-209ENST00000539197 BRD8Q9H0E9 1235 aa5.36□□□□□ -1.55
CCDC7-209ENST00000539197 OBP2BQ9NPH6 170 aa5.36□□□□□ -1.55
CCDC7-209ENST00000539197 SLC45A1Q9Y2W3 748 aa5.36□□□□□ -1.55
CCDC7-209ENST00000539197 ANO9A1A5B4 782 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 DYTNA2CJ06 578 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 C17orf100A8MU93 164 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 PRAC2D3DTV9 90 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 KIF1CO43896 1103 aaKnown RBP5.35□□□□□ -1.55
CCDC7-209ENST00000539197 CKMT1AP12532 417 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 DPP6P42658 865 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 CDK7P50613 346 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 ARL16Q0P5N6 197 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 SPARCL1Q14515 664 aa5.35□□□□□ -1.55
CCDC7-209ENST00000539197 ATPAF1Q5TC12 328 aaPredicted RBP5.35□□□□□ -1.55
CCDC7-209ENST00000539197 TYW3Q6IPR3 259 aaKnown RBP5.35□□□□□ -1.55
CCDC7-209ENST00000539197 SYNE3Q6ZMZ3 975 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms