RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 JUPP14923 745 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 UCHL3P15374 230 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 PRLRP16471 622 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 CKMT2P17540 419 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 OR1E1P30953 314 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 NOMO3P69849 1222 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 ILKQ13418 452 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 ZNF284Q2VY69 593 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 PROX2Q3B8N5 592 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 HES3Q5TGS1 186 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 ZNF783Q6ZMS7 281 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 HORMAD1Q86X24 394 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 OR7D4Q8NG98 312 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 GRIN3AQ8TCU5 1115 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 EPS8L1Q8TE68 723 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 KLHDC7BQ96G42 594 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 CFAP57Q96MR6 1250 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 UBL7Q96S82 380 aaPredicted RBP12.79□□□□□ -0.36
VAMP1-206ENST00000538970 HAPLN3Q96S86 360 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 HDAC8Q9BY41 377 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 TNKS2Q9H2K2 1166 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 DYRK4Q9NR20 520 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 IL36AQ9UHA7 158 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 DACH1Q9UI36 760 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 TMEM59LQ9UK28 342 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 ACACAQ13085 2346 aa12.79□□□□□ -0.36
VAMP1-206ENST00000538970 ILVBLA1L0T0 632 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 GOLGA8SH3BPF8 625 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 TRIM38O00635 465 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 SLC31A1O15431 190 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 SRGAP2O75044 1071 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 ZNF821O75541 412 aaPredicted RBP12.78□□□□□ -0.36
VAMP1-206ENST00000538970 ZMPSTE24O75844 475 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 HNRNPA2B1P22626 353 aaKnown RBP12.78□□□□□ -0.36
VAMP1-206ENST00000538970 ACP1P24666 158 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 SERPINH1P50454 418 aaKnown RBP12.78□□□□□ -0.36
VAMP1-206ENST00000538970 CCDC15Q0P6D6 951 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 TARDBPQ13148 414 aaKnown RBP eCLIP12.78□□□□□ -0.36
VAMP1-206ENST00000538970 TMEM259Q4ZIN3 620 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 GCNT7Q6ZNI0 430 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 DPY19L3Q6ZPD9 716 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 ERN2Q76MJ5 926 aaKnown RBP12.78□□□□□ -0.36
VAMP1-206ENST00000538970 ARCQ7LC44 396 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 FAM131BQ86XD5 332 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 SLC25A45Q8N413 288 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 MSANTD4Q8NCY6 345 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 KLK6Q92876 244 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 PPP1R16AQ96I34 528 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 STK33Q9BYT3 514 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 ZYG11BQ9C0D3 744 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 CEP44Q9C0F1 390 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 FZD3Q9NPG1 666 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 SAMSN1Q9NSI8 373 aaKnown RBP12.78□□□□□ -0.36
VAMP1-206ENST00000538970 ZFR2Q9UPR6 939 aaKnown RBP12.78□□□□□ -0.36
VAMP1-206ENST00000538970 RAI2Q9Y5P3 530 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 WASF2Q9Y6W5 498 aa12.78□□□□□ -0.36
VAMP1-206ENST00000538970 CFAP46Q8IYW2 2715 aa12.77□□□□□ -0.36
VAMP1-206ENST00000538970 PES1O00541 588 aaKnown RBP12.77□□□□□ -0.37
VAMP1-206ENST00000538970 SIGLEC6O43699 453 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 LEFTY1O75610 366 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 ENDOD1O94919 500 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 MMEP08473 750 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 DGKAP23743 735 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 EEF1GP26641 437 aaKnown RBP12.77□□□□□ -0.37
VAMP1-206ENST00000538970 AKT2P31751 481 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 RECQLP46063 649 aaPredicted RBP12.77□□□□□ -0.37
VAMP1-206ENST00000538970 NEK3P51956 506 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 ARF5P84085 180 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 GNA12Q03113 381 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 ZNF211Q13398 564 aaPredicted RBP12.77□□□□□ -0.37
VAMP1-206ENST00000538970 ARSIQ5FYB1 569 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 TCP11X2Q5H9J9 407 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 NAA35Q5VZE5 725 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 SEL1L3Q68CR1 1132 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 RETSATQ6NUM9 610 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 SLC22A18ASQ8N1D0 253 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 ZNF843Q8N446 348 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 PCDH20Q8N6Y1 951 aaKnown RBP12.77□□□□□ -0.37
VAMP1-206ENST00000538970 EMC1Q8N766 993 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 OR13H1Q8NG92 308 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 CPA5Q8WXQ8 436 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 RFFLQ8WZ73 363 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 SPON2Q9BUD6 331 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 CALN1Q9BXU9 219 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 NRSN2Q9GZP1 204 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 NUP62CLQ9H1M0 184 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 GANQ9H2C0 597 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 ATP13A1Q9HD20 1204 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 METTL5Q9NRN9 209 aaKnown RBP12.77□□□□□ -0.37
VAMP1-206ENST00000538970 KLHL11Q9NVR0 708 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 UCKL1Q9NWZ5 548 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 CHMP5Q9NZZ3 219 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 PPARGC1AQ9UBK2 798 aaKnown RBP12.77□□□□□ -0.37
VAMP1-206ENST00000538970 NOCTQ9UK39 431 aaKnown RBP12.77□□□□□ -0.37
VAMP1-206ENST00000538970 NAV2Q8IVL1 2488 aa12.77□□□□□ -0.37
VAMP1-206ENST00000538970 PCDH8O95206 1070 aa12.76□□□□□ -0.37
VAMP1-206ENST00000538970 CD160O95971 181 aa12.76□□□□□ -0.37
VAMP1-206ENST00000538970 GIMD1P0DJR0 217 aa12.76□□□□□ -0.37
VAMP1-206ENST00000538970 ADRB3P13945 408 aa12.76□□□□□ -0.37
VAMP1-206ENST00000538970 ITGB7P26010 798 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms