RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 SERPINB5P36952 375 aa12.61□□□□□ -0.39
USP3-203ENST00000538686 EIF2DP41214 584 aaKnown RBP12.61□□□□□ -0.39
USP3-203ENST00000538686 PLA2G16P53816 162 aa12.61□□□□□ -0.39
USP3-203ENST00000538686 MAPK11Q15759 364 aa12.61□□□□□ -0.39
USP3-203ENST00000538686 ESCO2Q56NI9 601 aa12.61□□□□□ -0.39
USP3-203ENST00000538686 SLC9A4Q6AI14 798 aa12.61□□□□□ -0.39
USP3-203ENST00000538686 HMBOX1Q6NT76 420 aa12.61□□□□□ -0.39
USP3-203ENST00000538686 OR10Z1Q8NGY1 313 aa12.61□□□□□ -0.39
USP3-203ENST00000538686 RHOXF1Q8NHV9 184 aa12.61□□□□□ -0.39
USP3-203ENST00000538686 CYGBQ8WWM9 190 aa12.61□□□□□ -0.39
USP3-203ENST00000538686 ASB2Q96Q27 587 aa12.61□□□□□ -0.39
USP3-203ENST00000538686 COG4Q9H9E3 785 aa12.61□□□□□ -0.39
USP3-203ENST00000538686 ZNF804BA4D1E1 1349 aa12.61□□□□□ -0.39
USP3-203ENST00000538686 PDZK1P1A8MUH7 402 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 M0R3G1 203 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 DLGAP1O14490 977 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 EDIL3O43854 480 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 H2AFYO75367 372 aaKnown RBP12.6□□□□□ -0.39
USP3-203ENST00000538686 PGK2P07205 417 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 YES1P07947 543 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 QARSP47897 775 aaKnown RBP12.6□□□□□ -0.39
USP3-203ENST00000538686 ETV1P50549 477 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 CABP4P57796 275 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 TAS2R40P59535 323 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 MAPRE2Q15555 327 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 YIF1BQ5BJH7 314 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 BRMS1LQ5PSV4 323 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 RBM48Q5RL73 367 aaKnown RBP12.6□□□□□ -0.39
USP3-203ENST00000538686 METTL2BQ6P1Q9 378 aaKnown RBP12.6□□□□□ -0.39
USP3-203ENST00000538686 CYP20A1Q6UW02 462 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 MAMSTRQ6ZN01 415 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 ADCK1Q86TW2 530 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 ZNF677Q86XU0 584 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 CBR4Q8N4T8 237 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 POC5Q8NA72 575 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 NPLOC4Q8TAT6 608 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 ZSCAN18Q8TBC5 510 aaPredicted RBP12.6□□□□□ -0.39
USP3-203ENST00000538686 GLMNQ92990 594 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 FKBP10Q96AY3 582 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 SLCO4A1Q96BD0 722 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 RIPOR3Q96MK2 946 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 IL12RB2Q99665 862 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 ZC3H12CQ9C0D7 883 aaKnown RBP12.6□□□□□ -0.39
USP3-203ENST00000538686 LHPPQ9H008 270 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 SCPEP1Q9HB40 452 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 TRIM39Q9HCM9 518 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 AGPAT3Q9NRZ7 376 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 WARS2Q9UGM6 360 aaKnown RBP12.6□□□□□ -0.39
USP3-203ENST00000538686 DCDC2Q9UHG0 476 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 PCDHB12Q9Y5F1 795 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 DGKBQ9Y6T7 804 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 CACNA1SQ13698 1873 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 KIAA1551Q9HCM1 1747 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 RBBP6Q7Z6E9 1792 aaKnown RBP12.6□□□□□ -0.39
USP3-203ENST00000538686 HEATR9A2RTY3 570 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 H0YAE9 185 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 RIMBP2O15034 1052 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 MED24O75448 989 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 EPN2O95208 641 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 RASAL1O95294 804 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 APOA1P02647 267 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 KRT1P04264 644 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 TRAPPC2P0DI81 140 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 TRAPPC2BP0DI82 140 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 GFAPP14136 432 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 CKMT2P17540 419 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 GJC1P36383 396 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 SLC26A3P40879 764 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 TNNI2P48788 182 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 PRIM2P49643 509 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 MAPK10P53779 464 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 CBX2Q14781 532 aaPredicted RBP12.6□□□□□ -0.39
USP3-203ENST00000538686 PLA2G4EQ3MJ16 856 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 TFDP3Q5H9I0 405 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 PAGE2BQ5JRK9 111 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 ARHGEF16Q5VV41 709 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 XAF1Q6GPH4 301 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 SPOCD1Q6ZMY3 1216 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 OR7A2PQ8NGA2 310 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 RSAD2Q8WXG1 361 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 TM9SF2Q99805 663 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 FUNDC2Q9BWH2 189 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 TRIM15Q9C019 465 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 SERHL2Q9H4I8 314 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 NARFLQ9H6Q4 476 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 TM9SF3Q9HD45 589 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 DCP1AQ9NPI6 582 aaPredicted RBP12.6□□□□□ -0.39
USP3-203ENST00000538686 ADA2Q9NZK5 511 aa12.6□□□□□ -0.39
USP3-203ENST00000538686 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.59□□□□□ -0.39
USP3-203ENST00000538686 RNF103-CHMP3A0A140T963 221 aa12.59□□□□□ -0.39
USP3-203ENST00000538686 MAGEB16A2A368 324 aa12.59□□□□□ -0.39
USP3-203ENST00000538686 PI4K2BG5E9Z4 385 aa12.59□□□□□ -0.39
USP3-203ENST00000538686 ALDH1A2O94788 518 aa12.59□□□□□ -0.39
USP3-203ENST00000538686 TMEM63AO94886 807 aa12.59□□□□□ -0.39
USP3-203ENST00000538686 FAM13AO94988 1023 aa12.59□□□□□ -0.39
USP3-203ENST00000538686 GSRP00390 522 aa12.59□□□□□ -0.39
USP3-203ENST00000538686 FCGR1AP12314 374 aa12.59□□□□□ -0.39
USP3-203ENST00000538686 UNGP13051 313 aaPredicted RBP12.59□□□□□ -0.39
USP3-203ENST00000538686 TCN1P20061 433 aaPredicted RBP12.59□□□□□ -0.39
USP3-203ENST00000538686 MSX2P35548 267 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms