RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 FICDQ9BVA6 458 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 TBC1D10AQ9BXI6 508 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 SLC25A51Q9H1U9 297 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 C12orf65Q9H3J6 166 aaKnown RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 KCNK13Q9HB14 408 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 SP110Q9HB58 689 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 HMX1Q9NP08 348 aaPredicted RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 ALG13Q9NP73 1137 aaKnown RBP6.74□□□□□ -1.33
USP28-206ENST00000538224 RBM22Q9NW64 420 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP28-206ENST00000538224 DNAJC28Q9NX36 388 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 RNF186Q9NXI6 227 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 EMCNQ9ULC0 261 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 PHF24Q9UPV7 400 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 PCDHB7Q9Y5E2 793 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 NR2E3Q9Y5X4 410 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 HS3ST4Q9Y661 456 aa6.74□□□□□ -1.33
USP28-206ENST00000538224 GBF1Q92538 1859 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 SPECC1L-ADORA2AF8WAN1 911 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 GYG2O15488 501 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 MSI1O43347 362 aaKnown RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 DDHD2O94830 711 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 PAPSS2O95340 614 aaPredicted RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 CBX6O95503 412 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 HSPA4LO95757 839 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 ALDH2P05091 517 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 T-ENOLP0DO92 83 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 AOC1P19801 751 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 FGFR3P22607 806 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 ADRA1AP35348 466 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 SERPINB5P36952 375 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 HARS2P49590 506 aaKnown RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 PAPOLAP51003 745 aaKnown RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 CLCN5P51795 746 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 GTF2A1P52655 376 aaPredicted RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 ABCE1P61221 599 aaKnown RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 IL10RBQ08334 325 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 GPR17Q13304 367 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 SLC12A1Q13621 1099 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 MRPL58Q14197 206 aaKnown RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 BTG3Q14201 252 aaPredicted RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 HSP90AA5PQ58FG0 334 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 CFAP157Q5JU67 520 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 CERCAMQ5T4B2 595 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 MARC1Q5VT66 337 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 RAPH1Q70E73 1250 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 CTU1Q7Z7A3 348 aaKnown RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 LONP2Q86WA8 852 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 CEP57Q86XR8 500 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 ZNF280BQ86YH2 543 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 TMPRSS6Q8IU80 811 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 NPAS4Q8IUM7 802 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 TP53INP2Q8IXH6 220 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 UNC5BQ8IZJ1 945 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 LRRC43Q8N309 656 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 TEX9Q8N6V9 391 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 CNTD1Q8N815 330 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 IPMKQ8NFU5 416 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 ZSCAN18Q8TBC5 510 aaPredicted RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 USP33Q8TEY7 942 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 SCG3Q8WXD2 468 aaKnown RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 PEX13Q92968 403 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 CCDC126Q96EE4 140 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 MFSD3Q96ES6 412 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 RILPQ96NA2 401 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 ZNF599Q96NL3 588 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 FCRL3Q96P31 734 aaPredicted RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 MCMBPQ9BTE3 642 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 SLC39A8Q9C0K1 460 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 C1orf21Q9H246 121 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 EBF2Q9HAK2 575 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 NMUR1Q9HB89 426 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 NMRAL1Q9HBL8 299 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 ARNT2Q9HBZ2 717 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 TRPC7Q9HCX4 862 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 PRDM5Q9NQX1 630 aaPredicted RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 IARS2Q9NSE4 1012 aaKnown RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.73□□□□□ -1.33
USP28-206ENST00000538224 PIH1D1Q9NWS0 290 aaKnown RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 OSER1Q9NX31 292 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 GMIPQ9P107 970 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 SFMBT1Q9UHJ3 866 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 TAGLN3Q9UI15 199 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 CORO1CQ9ULV4 474 aaPredicted RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 MAGED2Q9UNF1 606 aaPredicted RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 TRIM33Q9UPN9 1127 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 DNAJC16Q9Y2G8 782 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 PRG3Q9Y2Y8 225 aaPredicted RBP6.73□□□□□ -1.33
USP28-206ENST00000538224 PCDHB12Q9Y5F1 795 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 SNX10Q9Y5X0 201 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 PSAT1Q9Y617 370 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 PLXNA4Q9HCM2 1894 aa6.73□□□□□ -1.33
USP28-206ENST00000538224 TTC3P53804 2025 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 KIAA1671Q9BY89 1806 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 MTMR11A4FU01 709 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 CAPN14A8MX76 684 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 SLC22A2O15244 555 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 MAGEC1O60732 1142 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 TRIM13O60858 407 aa6.72□□□□□ -1.33
USP28-206ENST00000538224 RAMP2O60895 175 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms