RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 DCAF4L1Q3SXM0 396 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 C6orf52Q5T4I8 152 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 IYDQ6PHW0 289 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 PID1Q7Z2X4 250 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 BNIPLQ7Z465 357 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 CCNYQ8ND76 341 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 DIS3LQ8TF46 1054 aaKnown RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 STYXQ8WUJ0 223 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 ASB9Q96DX5 294 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 MAELQ96JY0 434 aaKnown RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF597Q96LX8 424 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 KLHL32Q96NJ5 620 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 C16orf70Q9BSU1 422 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 OSBPL11Q9BXB4 747 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 C1QTNF1Q9BXJ1 281 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 KATNBL1Q9H079 304 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 BRD8Q9H0E9 1235 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 TASP1Q9H6P5 420 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 PLEKHA5Q9HAU0 1116 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 SETD4Q9NVD3 440 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 LMCD1Q9NZU5 365 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 TLK1Q9UKI8 766 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 CEPT1Q9Y6K0 416 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF638Q14966 1978 aaKnown RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 TANC1Q9C0D5 1861 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 SCN1AP35498 2009 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 TSC2P49815 1807 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 TRPC5OSA6NMA1 111 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 PDHXO00330 501 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 DCLK1O15075 740 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 CFLARO15519 480 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 MTSS1O43312 755 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 TRMUO75648 421 aaKnown RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 VTNP04004 478 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF286BP0CG31 522 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 CDK4P11802 303 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 LCP1P13796 627 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF26P17031 533 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 TFEBP19484 476 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 PTPN3P26045 913 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 AIF1P55008 147 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 PKNOX1P55347 436 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 TRAP1Q12931 704 aaKnown RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 PTK2BQ14289 1009 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 ARL13AQ5H913 290 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 INTS6LQ5JSJ4 861 aaKnown RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 KCTD11Q693B1 232 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 ITPRIPL1Q6GPH6 555 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 FAM131BQ86XD5 332 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 ERI1Q8IV48 349 aaKnown RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 RBM12BQ8IXT5 1001 aaKnown RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 NUP93Q8N1F7 819 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 OR6B3Q8NGW1 331 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 AGR3Q8TD06 166 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 GAB3Q8WWW8 586 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 USP13Q92995 863 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 ATXN7L3BQ96GX2 97 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 DNAJC1Q96KC8 554 aaKnown RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 AGAP2Q99490 1192 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 NUF2Q9BZD4 464 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 RHOJQ9H4E5 214 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 CAB39LQ9H9S4 337 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 LRRC4Q9HBW1 653 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 RSL24D1Q9UHA3 163 aaKnown RBP12.34□□□□□ -0.43
CPSF7-218ENST00000537641 SARDHQ9UL12 918 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 PCDHGB4Q9UN71 923 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 PCDHGB5Q9Y5G0 923 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 AK5Q9Y6K8 562 aa12.34□□□□□ -0.43
CPSF7-218ENST00000537641 MYO18AQ92614 2054 aaKnown RBP12.33□□□□□ -0.44
CPSF7-218ENST00000537641 A0A0J9YVX5 310 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 EEF2KO00418 725 aaKnown RBP12.33□□□□□ -0.44
CPSF7-218ENST00000537641 NCAM2O15394 837 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 TSPAN1O60635 241 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 RNASEH2AO75792 299 aaKnown RBP12.33□□□□□ -0.44
CPSF7-218ENST00000537641 CDH2P19022 906 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-218ENST00000537641 CYP2B6P20813 491 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 SLC5A2P31639 672 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 ADCYAP1R1P41586 468 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 CDK9P50750 372 aaKnown RBP12.33□□□□□ -0.44
CPSF7-218ENST00000537641 TUBA4AP68366 448 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 SLC12A1Q13621 1099 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 DLG2Q15700 870 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 MGAT5BQ3V5L5 792 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 OTUD1Q5VV17 481 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-218ENST00000537641 LRRC8EQ6NSJ5 796 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 DEFB106AQ8N104 65 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 CRYBG2Q8N1P7 616 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 TMEM151AQ8N4L1 468 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 DNAAF3Q8N9W5 541 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.44
CPSF7-218ENST00000537641 UHRF1Q96T88 793 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-218ENST00000537641 CEP41Q9BYV8 373 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 GBA3Q9H227 469 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 MRM3Q9HC36 420 aaKnown RBP12.33□□□□□ -0.44
CPSF7-218ENST00000537641 PNPLA3Q9NST1 481 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 C20orf96Q9NUD7 363 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-218ENST00000537641 DNAAF2Q9NVR5 837 aaKnown RBP12.33□□□□□ -0.44
CPSF7-218ENST00000537641 ZDHHC2Q9UIJ5 367 aa12.33□□□□□ -0.44
CPSF7-218ENST00000537641 TRHDEQ9UKU6 1024 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms