RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 ACOX2Q99424 681 aa7.3□□□□□ -1.24
YBX3-206ENST00000536823 GABRG3Q99928 467 aa7.3□□□□□ -1.24
YBX3-206ENST00000536823 SLC2A11Q9BYW1 496 aa7.3□□□□□ -1.24
YBX3-206ENST00000536823 CD248Q9HCU0 757 aa7.3□□□□□ -1.24
YBX3-206ENST00000536823 SAMSN1Q9NSI8 373 aaKnown RBP7.3□□□□□ -1.24
YBX3-206ENST00000536823 SEMA4GQ9NTN9 838 aa7.3□□□□□ -1.24
YBX3-206ENST00000536823 DLL3Q9NYJ7 618 aa7.3□□□□□ -1.24
YBX3-206ENST00000536823 BCCIPQ9P287 314 aaKnown RBP eCLIP7.3□□□□□ -1.24
YBX3-206ENST00000536823 DNAJC12Q9UKB3 198 aa7.3□□□□□ -1.24
YBX3-206ENST00000536823 FHOD1Q9Y613 1164 aa7.3□□□□□ -1.24
YBX3-206ENST00000536823 ASCC3Q8N3C0 2202 aaKnown RBP7.29□□□□□ -1.24
YBX3-206ENST00000536823 FOXN3O00409 490 aaPredicted RBP7.29□□□□□ -1.24
YBX3-206ENST00000536823 NPC1O15118 1278 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 IRAK2O43187 625 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 NUAK1O60285 661 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 ACSL4O60488 711 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 TSPAN3O60637 253 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 RHOBTB1O94844 696 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 GABRG2P18507 467 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 SDHBP21912 280 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 BCKDHBP21953 392 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 GBP1P32455 592 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 MPLP40238 635 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 WASP42768 502 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 SLC11A2P49281 568 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 TBX4P57082 545 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 BPIFB4P59827 614 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 RAPGEF1Q13905 1077 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 PUM1Q14671 1186 aaKnown RBP eCLIP7.29□□□□□ -1.24
YBX3-206ENST00000536823 DRAP1Q14919 205 aaPredicted RBP7.29□□□□□ -1.24
YBX3-206ENST00000536823 NUMA1Q14980 2115 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 EIF4HQ15056 248 aaKnown RBP7.29□□□□□ -1.24
YBX3-206ENST00000536823 E2F5Q15329 346 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 STX1AQ16623 288 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 FAM133BQ5BKY9 247 aaKnown RBP7.29□□□□□ -1.24
YBX3-206ENST00000536823 KLHDC7AQ5VTJ3 777 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 C11orf57Q6ZUT1 292 aaPredicted RBP7.29□□□□□ -1.24
YBX3-206ENST00000536823 TAC4Q86UU9 113 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 PASD1Q8IV76 773 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 CHPFQ8IZ52 775 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.29□□□□□ -1.24
YBX3-206ENST00000536823 WFIKKN2Q8TEU8 576 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 IPO4Q8TEX9 1081 aaKnown RBP7.29□□□□□ -1.24
YBX3-206ENST00000536823 DDI1Q8WTU0 396 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 SLC39A13Q96H72 371 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 PRICKLE1Q96MT3 831 aaPredicted RBP7.29□□□□□ -1.24
YBX3-206ENST00000536823 CPXM1Q96SM3 734 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 LSM14BQ9BX40 385 aaKnown RBP7.29□□□□□ -1.24
YBX3-206ENST00000536823 GANQ9H2C0 597 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 LHX5Q9H2C1 402 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 ARRDC1-AS1Q9H2J1 176 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 POPDC2Q9HBU9 364 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 PLCB1Q9NQ66 1216 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 ANO10Q9NW15 660 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 CACNA2D2Q9NY47 1150 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 TAB2Q9NYJ8 693 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 THAP10Q9P2Z0 257 aaPredicted RBP7.29□□□□□ -1.24
YBX3-206ENST00000536823 TJP2Q9UDY2 1190 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 CLEC4EQ9ULY5 219 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 INVSQ9Y283 1065 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 TLR6Q9Y2C9 796 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 CEP83Q9Y592 693 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 PCDHGB7Q9Y5F8 929 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.29□□□□□ -1.24
YBX3-206ENST00000536823 CABIN1Q9Y6J0 2220 aa7.29□□□□□ -1.24
YBX3-206ENST00000536823 MUC22E2RYF6 1773 aaPredicted RBP7.28□□□□□ -1.24
YBX3-206ENST00000536823 BCLAF3A2AJT9 711 aaKnown RBP7.28□□□□□ -1.24
YBX3-206ENST00000536823 CAPN9O14815 690 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 HSF2BPO75031 334 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 IGLV3-25P01717 112 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 APOEP02649 317 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 ZNF806P0C7X5 589 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 UCHL3P15374 230 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 SLC6A4P31645 630 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 KRT9P35527 623 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 SGSHP51688 502 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 YWHAZP63104 245 aaKnown RBP7.28□□□□□ -1.24
YBX3-206ENST00000536823 MYL5Q02045 173 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 ZNF252P-AS1Q0IIN9 211 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 ENPP2Q13822 863 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 BYSLQ13895 437 aaKnown RBP7.28□□□□□ -1.24
YBX3-206ENST00000536823 STARD3Q14849 445 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 KRT31Q15323 416 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 SF3A2Q15428 464 aaKnown RBP7.28□□□□□ -1.24
YBX3-206ENST00000536823 CCDC6Q16204 474 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 PTPN20Q4JDL3 420 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 AASDHQ4L235 1098 aaPredicted RBP7.28□□□□□ -1.24
YBX3-206ENST00000536823 MPP7Q5T2T1 576 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 CCDC183Q5T5S1 534 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 PIK3R6Q5UE93 754 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 SYPL2Q5VXT5 272 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 NADSYN1Q6IA69 706 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 SDE2Q6IQ49 451 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 KIAA1211LQ6NV74 962 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 RFWD3Q6PCD5 774 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 OLFML1Q6UWY5 402 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 LPCAT2Q7L5N7 544 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 PDZD3Q86UT5 571 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 SLC47A2Q86VL8 602 aa7.28□□□□□ -1.24
YBX3-206ENST00000536823 WDTC1Q8N5D0 677 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms