RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 OR6K2Q8NGY2 324 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 ZC3H10Q96K80 434 aaKnown RBP18.22■□□□□ 0.51
DDX55-204ENST00000536079 ZNF670Q9BS34 389 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 TM6SF2Q9BZW4 377 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 PABPC3Q9H361 631 aaKnown RBP18.22■□□□□ 0.51
DDX55-204ENST00000536079 WSB2Q9NYS7 404 aaPredicted RBP18.22■□□□□ 0.51
DDX55-204ENST00000536079 RCOR3Q9P2K3 495 aaPredicted RBP18.22■□□□□ 0.51
DDX55-204ENST00000536079 PPM1HQ9ULR3 514 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 HPCAL4Q9UM19 191 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 NYNRINQ9P2P1 1898 aaKnown RBP18.22■□□□□ 0.51
DDX55-204ENST00000536079 NUP205Q92621 2012 aa18.22■□□□□ 0.51
DDX55-204ENST00000536079 ARHGAP42A6NI28 874 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 ARHGAP6O43182 974 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 ZNF217O75362 1048 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 IGLV3-19P01714 112 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 SLC8A1P32418 973 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 NAP1L1P55209 391 aaKnown RBP18.21■□□□□ 0.51
DDX55-204ENST00000536079 GBE1Q04446 702 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 FAM182AQ5T1J6 154 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 ZFYVE27Q5T4F4 411 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 PMS2CLQ68D20 193 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 MFSD7Q6UXD7 560 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 ABCA7Q8IZY2 2146 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 TOE1Q96GM8 510 aaKnown RBP18.21■□□□□ 0.51
DDX55-204ENST00000536079 RNF157Q96PX1 679 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 CEP44Q9C0F1 390 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 SEMA4AQ9H3S1 761 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 FBRSQ9HAH7 460 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 WASF2Q9Y6W5 498 aa18.21■□□□□ 0.51
DDX55-204ENST00000536079 ZFHX2Q9C0A1 2572 aaPredicted RBP18.21■□□□□ 0.51
DDX55-204ENST00000536079 WDR87Q6ZQQ6 2873 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 A0A1W2PP55 124 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 GJB3O75712 270 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 PEX11BO96011 259 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 IL1BP01584 269 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 DNTTP04053 509 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 ACADMP11310 421 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 CD6P30203 668 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 CHRNA3P32297 505 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 ACSL1P33121 698 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 DRD3P35462 400 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 PTGER3P43115 390 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 ADCY2Q08462 1091 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 PAFAH1B3Q15102 231 aaKnown RBP18.2■□□□□ 0.5
DDX55-204ENST00000536079 CARD16Q5EG05 197 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 ARMCX6Q7L4S7 300 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 ALYREFQ86V81 257 aaKnown RBP18.2■□□□□ 0.5
DDX55-204ENST00000536079 SLC41A1Q8IVJ1 513 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 LZTR1Q8N653 840 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 PCDH20Q8N6Y1 951 aaKnown RBP18.2■□□□□ 0.5
DDX55-204ENST00000536079 CCDC112Q8NEF3 446 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 PIP4K2CQ8TBX8 421 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 OR8D1Q8WZ84 308 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 ARRDC3Q96B67 414 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 SPACA7Q96KW9 195 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 ZNF830Q96NB3 372 aaPredicted RBP18.2■□□□□ 0.5
DDX55-204ENST00000536079 NEUROG2Q9H2A3 272 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 KCNF1Q9H3M0 494 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 LHX3Q9UBR4 397 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 UBA2Q9UBT2 640 aaPredicted RBP18.2■□□□□ 0.5
DDX55-204ENST00000536079 IPO11Q9UI26 975 aaKnown RBP18.2■□□□□ 0.5
DDX55-204ENST00000536079 CAPN6Q9Y6Q1 641 aa18.2■□□□□ 0.5
DDX55-204ENST00000536079 CXorf51AA0A1B0GTR3 108 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 MUSKO15146 869 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 INSIG1O15503 277 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 PSTPIP1O43586 416 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 GFRA3O60609 400 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 MAFKO60675 156 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 PALMO75781 387 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 CDKN2BP42772 138 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 RGRP47804 291 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 CCNHP51946 323 aaPredicted RBP18.19■□□□□ 0.5
DDX55-204ENST00000536079 RPL6Q02878 288 aaKnown RBP18.19■□□□□ 0.5
DDX55-204ENST00000536079 KIF5AQ12840 1032 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 CCDC6Q16204 474 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 TAZQ16635 292 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 ARSIQ5FYB1 569 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 NPNTQ6UXI9 565 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 MAP7D3Q8IWC1 876 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 PLD5Q8N7P1 536 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 GRIN3AQ8TCU5 1115 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 ISG20Q96AZ6 181 aaKnown RBP18.19■□□□□ 0.5
DDX55-204ENST00000536079 ZNF419Q96HQ0 510 aaPredicted RBP18.19■□□□□ 0.5
DDX55-204ENST00000536079 EXOC2Q96KP1 924 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 NSMCE3Q96MG7 304 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 GPR174Q9BXC1 333 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 FBXL12Q9NXK8 326 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 DONSONQ9NYP3 566 aa18.19■□□□□ 0.5
DDX55-204ENST00000536079 HECAQ9UBI9 543 aaPredicted RBP18.19■□□□□ 0.5
DDX55-204ENST00000536079 SDK1Q7Z5N4 2213 aa18.18■□□□□ 0.5
DDX55-204ENST00000536079 ZSCAN5CA6NGD5 496 aaPredicted RBP18.18■□□□□ 0.5
DDX55-204ENST00000536079 MAP3K13O43283 966 aa18.18■□□□□ 0.5
DDX55-204ENST00000536079 RNASEH1O60930 286 aaKnown RBP18.18■□□□□ 0.5
DDX55-204ENST00000536079 LEFTY1O75610 366 aa18.18■□□□□ 0.5
DDX55-204ENST00000536079 KRT10P13645 584 aa18.18■□□□□ 0.5
DDX55-204ENST00000536079 ZBTB16Q05516 673 aa18.18■□□□□ 0.5
DDX55-204ENST00000536079 INO80DQ53TQ3 878 aaPredicted RBP18.18■□□□□ 0.5
DDX55-204ENST00000536079 LAIR1Q6GTX8 287 aa18.18■□□□□ 0.5
DDX55-204ENST00000536079 NT5DC3Q86UY8 548 aa18.18■□□□□ 0.5
DDX55-204ENST00000536079 KATNAL2Q8IYT4 538 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms