RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 SIK2Q9H0K1 926 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 TNKS2Q9H2K2 1166 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 IL36AQ9UHA7 158 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 FLNCQ14315 2725 aa8.23□□□□□ -1.09
CHFR-211ENST00000535897 LY6G6EA0A0G2JKS1 128 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 A0A1W2PQ27 194 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 A0A1W2PQ64 194 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 PMS2P1A4D2B8 440 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 K7ENP7 123 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 NEMP1O14524 444 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 FPGTO14772 594 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 PSMA7O14818 248 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 MUSKO15146 869 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 AQP9O43315 295 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 SNAP91O60641 907 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 HSF2BPO75031 334 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 PAGE1O75459 146 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 SMC2O95347 1197 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 ADCY5O95622 1261 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 PAK4O96013 591 aaPredicted RBP8.22□□□□□ -1.09
CHFR-211ENST00000535897 MT-CO1P00395 513 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 CSF2P04141 144 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 NME1P15531 152 aaKnown RBP8.22□□□□□ -1.09
CHFR-211ENST00000535897 JUNDP17535 347 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 RRM1P23921 792 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 GNA15P30679 374 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 USP8P40818 1118 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 RPL34P49207 117 aaKnown RBP8.22□□□□□ -1.09
CHFR-211ENST00000535897 RPIAP49247 311 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 DNA2P51530 1060 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 NEK3P51956 506 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 RPS21P63220 83 aaKnown RBP8.22□□□□□ -1.09
CHFR-211ENST00000535897 NFATC3Q12968 1075 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 SGCGQ13326 291 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 MTA1Q13330 715 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 PDCLQ13371 301 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 PDE1CQ14123 709 aaPredicted RBP8.22□□□□□ -1.09
CHFR-211ENST00000535897 FZD2Q14332 565 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 NR0B2Q15466 257 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 EFHC1Q5JVL4 640 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 C6orf132Q5T0Z8 1188 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 KIAA1161Q6NSJ0 714 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 C22orf39Q6P5X5 142 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 INO80CQ6PI98 192 aaPredicted RBP8.22□□□□□ -1.09
CHFR-211ENST00000535897 LINGO4Q6UY18 593 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 ABI3BPQ7Z7G0 1075 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 JAMLQ86YT9 394 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 PASD1Q8IV76 773 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 CHST14Q8NCH0 376 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 TMIEQ8NEW7 156 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 OR2A12Q8NGT7 310 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 TPCN2Q8NHX9 752 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 WDR36Q8NI36 951 aaKnown RBP8.22□□□□□ -1.09
CHFR-211ENST00000535897 FAM174AQ8TBP5 190 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 GLMNQ92990 594 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 SMARCE1Q969G3 411 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 GRAMD1AQ96CP6 724 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 IFT43Q96FT9 208 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 SLC46A1Q96NT5 459 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 ARHGAP9Q9BRR9 750 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 SLC17A9Q9BYT1 436 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 TRIM4Q9C037 500 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 SCAND2PQ9GZW5 306 aaPredicted RBP8.22□□□□□ -1.09
CHFR-211ENST00000535897 SYNCQ9H7C4 482 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 VPS51Q9UID3 782 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 ZFR2Q9UPR6 939 aaKnown RBP8.22□□□□□ -1.09
CHFR-211ENST00000535897 HS3ST2Q9Y278 367 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 PCDHGA8Q9Y5G5 932 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 ENTPD2Q9Y5L3 495 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 HS3ST4Q9Y661 456 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 U3KQA8 63 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 TRPM6Q9BX84 2022 aa8.22□□□□□ -1.09
CHFR-211ENST00000535897 TLN1Q9Y490 2541 aaKnown RBP8.21□□□□□ -1.1
CHFR-211ENST00000535897 SPTY2D1-AS1A0A0U1RR47 76 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 A0A1W2PNU3 283 aaPredicted RBP8.21□□□□□ -1.1
CHFR-211ENST00000535897 GOLGA6L4A6NEF3 574 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 POM121BA6NF01 834 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 M0QYT0 321 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 P4HA2O15460 535 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 SMAD6O43541 496 aaKnown RBP8.21□□□□□ -1.1
CHFR-211ENST00000535897 LEFTY1O75610 366 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 TCEA3O75764 348 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 CNTN5O94779 1100 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 ADRB3P13945 408 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 RABIFP47224 123 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 CLCN6P51797 869 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 THOP1P52888 689 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 CDH4P55283 916 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 SPIDRQ14159 915 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 DRAP1Q14919 205 aaPredicted RBP8.21□□□□□ -1.1
CHFR-211ENST00000535897 TMEM259Q4ZIN3 620 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 ISM2Q6H9L7 571 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 KLHL10Q6JEL2 608 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 IGF2-ASQ6U949 168 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 KYAT3Q6YP21 454 aaKnown RBP8.21□□□□□ -1.1
CHFR-211ENST00000535897 DPY19L3Q6ZPD9 716 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 TFAP2DQ7Z6R9 452 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 C14orf80Q86SX3 495 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 TMEM110Q86TL2 294 aa8.21□□□□□ -1.1
CHFR-211ENST00000535897 RYBPQ8N488 228 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms