RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 MYLK2Q9H1R3 596 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 DNAJC18Q9H819 358 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 MARCH7Q9H992 704 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 BLOC1S4Q9NUP1 217 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 KLHL28Q9NXS3 571 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 EHD3Q9NZN3 535 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 FAM198AQ9UFP1 575 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 DDX20Q9UHI6 824 aaKnown RBP12.79□□□□□ -0.36
SPG11-203ENST00000535302 ANKDD1BA6NHY2 528 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 PPP3CAQ08209 521 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 KIAA0408Q6ZU52 694 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 HMX1Q9NP08 348 aaPredicted RBP12.79□□□□□ -0.36
SPG11-203ENST00000535302 ACSS2Q9NR19 701 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 LRRC4BQ9NT99 713 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 NFASCO94856 1347 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 H0Y858 1186 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 PEX10O60683 326 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 SMIM10L2AP0DMW4 78 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 SMIM10L2BP0DMW5 78 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 RPL4P36578 427 aaKnown RBP12.79□□□□□ -0.36
SPG11-203ENST00000535302 IDH2P48735 452 aaKnown RBP12.79□□□□□ -0.36
SPG11-203ENST00000535302 CORO7P57737 925 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 DDR1Q08345 913 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 TBX2Q13207 712 aaPredicted RBP12.79□□□□□ -0.36
SPG11-203ENST00000535302 ITGADQ13349 1161 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 PYDC2Q56P42 97 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 SERPINB11Q96P15 392 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 SLITRK2Q9H156 845 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 POPDC2Q9HBU9 364 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 ACKR2O00590 384 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 FARP2O94887 1054 aaPredicted RBP12.79□□□□□ -0.36
SPG11-203ENST00000535302 OR56A5P0C7T3 313 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 MAXP61244 160 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 ABATP80404 500 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 MCL1Q07820 350 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 TSHZ1Q6ZSZ6 1077 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 C3orf20Q8ND61 904 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 BPIFB6Q8NFQ5 453 aa12.79□□□□□ -0.36
SPG11-203ENST00000535302 MYPNQ86TC9 1320 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 TRBV23OR9-2A0A075B6M9 112 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 IRF6O14896 467 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 CYP4B1P13584 511 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 CTPS1P17812 591 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 TGM3Q08188 693 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 TRAF3Q13114 568 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 RETSATQ6NUM9 610 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 WDR93Q6P2C0 686 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 FBXL19Q6PCT2 694 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 SYT12Q8IV01 421 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 SLC22A9Q8IVM8 553 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 SLC35C1Q96A29 364 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 TMPRSS4Q9NRS4 437 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 ITSN1Q15811 1721 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 ZNF839A8K0R7 811 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 B4GALT5O43286 388 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 C4BPBP20851 252 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 SPIDRQ14159 915 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 GALNT3Q14435 633 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 DCXO43602 365 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 OR10H2O60403 315 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 PRG2P13727 222 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 DPYSL3Q14195 570 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 FAAH2Q6GMR7 532 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 ATG14Q6ZNE5 492 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 TRNT1Q96Q11 434 aaKnown RBP12.78□□□□□ -0.36
SPG11-203ENST00000535302 PLOD3O60568 738 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 COX7A2P14406 83 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 PTPN1P18031 435 aaKnown RBP12.78□□□□□ -0.36
SPG11-203ENST00000535302 FASP25445 335 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 RAB27AP51159 221 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 SFSWAPQ12872 951 aaKnown RBP12.78□□□□□ -0.36
SPG11-203ENST00000535302 ZNF268Q14587 947 aaPredicted RBP12.78□□□□□ -0.36
SPG11-203ENST00000535302 PERM1Q5SV97 790 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 POLNQ7Z5Q5 900 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 DAW1Q8N136 415 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 OXNAD1Q96HP4 312 aaPredicted RBP12.78□□□□□ -0.36
SPG11-203ENST00000535302 ABHD16BQ9H3Z7 469 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 MRPL17Q9NRX2 175 aaKnown RBP12.78□□□□□ -0.36
SPG11-203ENST00000535302 KLQ9UEF7 1012 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 PCP4L1A6NKN8 68 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 BTN3A3O00478 584 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 TM9SF1O15321 606 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 FFAR2O15552 330 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 TBL1XO60907 577 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 ZNF7P17097 686 aaPredicted RBP12.78□□□□□ -0.36
SPG11-203ENST00000535302 RENBPP51606 427 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 FSTL1Q12841 308 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 CRY1Q16526 586 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 PFKFB4Q16877 469 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 SPANXN3Q5MJ09 141 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 CNSTQ6PJW8 725 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 CHPFQ8IZ52 775 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 C12orf29Q8N999 325 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 CPNE1Q99829 537 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 COPS4Q9BT78 406 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 NLNQ9BYT8 704 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 FANCEQ9HB96 536 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 ARL15Q9NXU5 204 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 VAV3Q9UKW4 847 aa12.78□□□□□ -0.36
SPG11-203ENST00000535302 PCDHA3Q9Y5H8 950 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms