RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 KRT12Q99456 494 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 TMEM79Q9BSE2 394 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 TARS2Q9BW92 718 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 TEKT3Q9BXF9 490 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ACPTQ9BZG2 426 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 LIN28AQ9H9Z2 209 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 SIAEQ9HAT2 523 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 PPANQ9NQ55 473 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 VPS45Q9NRW7 570 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 DDX28Q9NUL7 540 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 FGFR1OP2Q9NVK5 253 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 THG1LQ9NWX6 298 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 GPRC5DQ9NZD1 345 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CEP72Q9P209 647 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 RCOR3Q9P2K3 495 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 UXTQ9UBK9 157 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 LIMA1Q9UHB6 759 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 VAV3Q9UKW4 847 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 PPM1HQ9ULR3 514 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 SMG5Q9UPR3 1016 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 PRELID3BQ9Y3B1 194 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 SAMHD1Q9Y3Z3 626 aaKnown RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 INO80Q9ULG1 1556 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-201ENST00000535076 CARMIL3Q8ND23 1372 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 MED23Q9ULK4 1368 aa5.29□□□□□ -1.56
SNHG1-201ENST00000535076 ATP7BP35670 1465 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 TMEM82A0PJX8 343 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 PMS2P1A4D2B8 440 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 CCDC160A6NGH7 325 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 PCP4L1A6NKN8 68 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 TRAF5O00463 557 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 TXNL1O43396 289 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 KRT86O43790 486 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 CTNND1O60716 968 aaKnown RBP5.28□□□□□ -1.56
SNHG1-201ENST00000535076 BCAS1O75363 584 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-201ENST00000535076 CSDE1O75534 798 aaKnown RBP5.28□□□□□ -1.56
SNHG1-201ENST00000535076 SLC22A3O75751 556 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 DCTN3O75935 186 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 OR7A10O76100 309 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 MYO1DO94832 1006 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 SEMA3DO95025 777 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 LARGE1O95461 756 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 INHBBP09529 407 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 IFIT1P09914 478 aaKnown RBP5.28□□□□□ -1.56
SNHG1-201ENST00000535076 ARP10275 920 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 CYP2A6P11509 494 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-201ENST00000535076 PRPS2P11908 318 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 ENO3P13929 434 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-201ENST00000535076 TRIM27P14373 513 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 IL1R1P14778 569 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 ETS2P15036 469 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 RAG1P15918 1043 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 PTPN1P18031 435 aaKnown RBP5.28□□□□□ -1.56
SNHG1-201ENST00000535076 RAB3AP20336 220 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 KELP23276 732 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 GDI1P31150 447 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 HOXA11P31270 313 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-201ENST00000535076 BMI1P35226 326 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 RCVRNP35243 200 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 CCR10P46092 362 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 CHN2P52757 468 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 MAPK12P53778 367 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 CDH4P55283 916 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 RNASE9P60153 205 aaKnown RBP5.28□□□□□ -1.56
SNHG1-201ENST00000535076 ERVK-24P63145 666 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 ASIC1P78348 528 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 PHC1P78364 1004 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 FLI1Q01543 452 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-201ENST00000535076 BNC1Q01954 994 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 ARID5AQ03989 594 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 FOLH1Q04609 750 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 RING1Q06587 406 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 BFSP1Q12934 665 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 SELENBP1Q13228 472 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 PMS2P3Q13401 168 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 PICALMQ13492 652 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 MED21Q13503 144 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 INPP5AQ14642 412 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 C16orf72Q14CZ0 275 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 TMEM132BQ14DG7 1078 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 CCDC6Q16204 474 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 LBHQ53QV2 105 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-201ENST00000535076 DGKKQ5KSL6 1271 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 NT5DC1Q5TFE4 455 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 ARHGEF16Q5VV41 709 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 SULT1C3Q6IMI6 304 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 CLEC2AQ6UVW9 174 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 C4orf50Q6ZRC1 276 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 GPRIN3Q6ZVF9 776 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 FAM214BQ7L5A3 538 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 TTC7BQ86TV6 843 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 ZNF410Q86VK4 478 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 GPBP1Q86WP2 473 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 VSIG1Q86XK7 387 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 DGKHQ86XP1 1220 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 MAPKAPK5Q8IW41 473 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 DENND6AQ8IWF6 608 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 NRSN1Q8IZ57 195 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 TAGAPQ8N103 731 aa5.28□□□□□ -1.56
SNHG1-201ENST00000535076 SH2D3CQ8N5H7 860 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms