RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CEACAM1P13688 526 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TNFAIP3P21580 790 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 C5AR1P21730 350 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 IL1R2P27930 398 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 CHRNA3P32297 505 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 HOXD12P35452 270 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 DNA2P51530 1060 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 ZNF143P52747 638 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 ATXN3P54252 364 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 GSCP56915 257 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 CLDN2P57739 230 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 ZBTB16Q05516 673 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 SLC12A1Q13621 1099 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 ELAVL3Q14576 367 aaKnown RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 ASIC2Q16515 512 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 ZSCAN23Q3MJ62 389 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TTC31Q49AM3 519 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TTC39BQ5VTQ0 682 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TBC1D3GQ6DHY5 549 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TBC1D3CQ6IPX1 549 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 DNAJC24Q6P3W2 148 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 C22orf39Q6P5X5 142 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TRIM72Q6ZMU5 477 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 USP30Q70CQ3 517 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 SND1Q7KZF4 910 aaKnown RBP eCLIP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 ARCQ7LC44 396 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 NAXDQ8IW45 347 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 CCDC117Q8IWD4 279 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TBC1D3Q8IZP1 549 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 OR2T34Q8NGX1 318 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 ARHGEF26Q96DR7 871 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 HMCESQ96FZ2 354 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 CELF6Q96J87 481 aaKnown RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 KCTD15Q96SI1 283 aaPredicted RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 SELENOOQ9BVL4 669 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 OSBPL2Q9H1P3 480 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 SGK2Q9HBY8 427 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 ATP13A1Q9HD20 1204 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TM7SF3Q9NS93 570 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 RRN3Q9NYV6 651 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 PCSK1NQ9UHG2 260 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 SLC25A13Q9UJS0 675 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 PCOLCE2Q9UKZ9 415 aa9.84□□□□□ -0.83
SSBP3-215ENST00000533946 GOLGA4Q13439 2230 aaKnown RBP9.84□□□□□ -0.83
SSBP3-215ENST00000533946 TRPM6Q9BX84 2022 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 ILVBLA1L0T0 632 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 J3KR12 359 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 KPNA3O00505 521 aaPredicted RBP9.83□□□□□ -0.84
SSBP3-215ENST00000533946 SLC31A1O15431 190 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 LATO43561 262 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 PLRG1O43660 514 aaKnown RBP9.83□□□□□ -0.84
SSBP3-215ENST00000533946 CREB3O43889 395 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 RNGTTO60942 597 aaKnown RBP9.83□□□□□ -0.84
SSBP3-215ENST00000533946 TPM2P07951 284 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 SYPP08247 313 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 GNSP15586 552 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 FERP16591 822 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 ABL2P42684 1182 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 RGRP47804 291 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 SERPINH1P50454 418 aaKnown RBP9.83□□□□□ -0.84
SSBP3-215ENST00000533946 AFF3P51826 1226 aaKnown RBP9.83□□□□□ -0.84
SSBP3-215ENST00000533946 SNX16P57768 344 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 C1QBPQ07021 282 aaKnown RBP9.83□□□□□ -0.84
SSBP3-215ENST00000533946 PTPRRQ15256 657 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 TRIP6Q15654 476 aaKnown RBP9.83□□□□□ -0.84
SSBP3-215ENST00000533946 KLHL40Q2TBA0 621 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 ZNF542PQ5EBM4 170 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 PLEKHA7Q6IQ23 1121 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 LRRC31Q6UY01 552 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 DBX2Q6ZNG2 339 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 PARS2Q7L3T8 475 aaKnown RBP9.83□□□□□ -0.84
SSBP3-215ENST00000533946 STRADAQ7RTN6 431 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 SETD3Q86TU7 594 aaPredicted RBP9.83□□□□□ -0.84
SSBP3-215ENST00000533946 NPWQ8N729 165 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 DCAF4L2Q8NA75 395 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 BAHD1Q8TBE0 780 aaPredicted RBP9.83□□□□□ -0.84
SSBP3-215ENST00000533946 SETD7Q8WTS6 366 aaKnown RBP9.83□□□□□ -0.84
SSBP3-215ENST00000533946 LRRN4Q8WUT4 740 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 OR8D1Q8WZ84 308 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 SERAC1Q96JX3 654 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 EXOC2Q96KP1 924 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 ETNK2Q9NVF9 386 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 TMEM248Q9NWD8 314 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 AIPL1Q9NZN9 384 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 IFNKQ9P0W0 207 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 MYO1AQ9UBC5 1043 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 PNMA8BQ9ULN7 279 aaPredicted RBP9.83□□□□□ -0.84
SSBP3-215ENST00000533946 NCKAP1Q9Y2A7 1128 aa9.83□□□□□ -0.84
SSBP3-215ENST00000533946 PKD1L2Q7Z442 2459 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 ANKRD11Q6UB99 2663 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-215ENST00000533946 A0A1W2PQU0 124 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 FAM149AA5PLN7 773 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 TMEM191CA6NGB0 347 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 TAF4O00268 1085 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 RNASEH1O60930 286 aaKnown RBP9.82□□□□□ -0.84
SSBP3-215ENST00000533946 SDC3O75056 442 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 ADH1BP00325 375 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 PRKCGP05129 697 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 CALB1P05937 261 aa9.82□□□□□ -0.84
SSBP3-215ENST00000533946 FTH1P19P0C7X4 201 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms