RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 ADAM28Q9UKQ2 775 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 NDRG2Q9UN36 371 aaKnown RBP6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 ASTN2O75129 1339 aaPredicted RBP6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 CCDC154A6NI56 674 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 PHGDHO43175 533 aaKnown RBP6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 TREHO43280 583 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 ACSL4O60488 711 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 CNOT3O75175 753 aaKnown RBP6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 DUSP11O75319 330 aaKnown RBP6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 NFKB1P19838 968 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 ATP4AP20648 1035 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 JAK1P23458 1154 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 S100A3P33764 101 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 MSLNQ13421 630 aaPredicted RBP6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 RCN1Q15293 331 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 LRRC38Q5VT99 294 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 FBXW10Q5XX13 1052 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 MON1AQ86VX9 555 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 PARGQ86W56 976 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 GATAD2AQ86YP4 633 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 TCP10LQ8TDR4 215 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 POMKQ9H5K3 350 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 CNGB3Q9NQW8 809 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 THAP1Q9NVV9 213 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 NINJ2Q9NZG7 142 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 BTBD7Q9P203 1132 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 DDX20Q9UHI6 824 aaKnown RBP6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 FTH1P02794 183 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 UBTFL6P0CB48 400 aaPredicted RBP6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 UQCRBP14927 111 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 CTPS1P17812 591 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 TTPAP49638 278 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 PEX6Q13608 980 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 FASTKQ14296 549 aaKnown RBP6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 FAM98BQ52LJ0 330 aaKnown RBP6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 PRMT9Q6P2P2 845 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 AFTPHQ6ULP2 937 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 ZNF621Q6ZSS3 439 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 SRLQ86TD4 932 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 SLC9A9Q8IVB4 645 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 TMEM132CQ8N3T6 1108 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 SELENOMQ8WWX9 145 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 ZBTB10Q96DT7 871 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 CHST7Q9NS84 486 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 SAE1Q9UBE0 346 aaPredicted RBP6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 CROTQ9UKG9 612 aa6.47□□□□□ -1.37
UBQLN1-206ENST00000533705 ASTN1O14525 1302 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 INPP4BO15327 924 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 RGS5O15539 181 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 SEPT4O43236 478 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 TKTP29401 623 aaKnown RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 MRPS5P82675 430 aaKnown RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 FAAP100Q0VG06 881 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 C16orf72Q14CZ0 275 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 ZACNQ401N2 412 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 ALKBH2Q6NS38 261 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 FAM45BPQ6NSW5 357 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 PSRC1Q6PGN9 363 aaPredicted RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 LBX2Q6XYB7 198 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 EFCAB3Q8N7B9 438 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 C12orf29Q8N999 325 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 MYCBPAPQ8TBZ2 947 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 UTP15Q8TED0 518 aaKnown RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 RERGQ96A58 199 aaPredicted RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 CENPTQ96BT3 561 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 INPP4AQ96PE3 977 aaPredicted RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 GPR20Q99678 358 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 HSD17B14Q9BPX1 270 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 DUSP16Q9BY84 665 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 ACP6Q9NPH0 428 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 ADPRHL2Q9NX46 363 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 NFKBIL1Q9UBC1 381 aaPredicted RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 KLQ9UEF7 1012 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 CHURC1-FNTBB4DL54 471 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 PEX10O60683 326 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 PIRTP0C851 137 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 COX7A2P14406 83 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 ATP6V1B1P15313 513 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 RPA3P35244 121 aaPredicted RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 C1DQ13901 141 aaKnown RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 ZNHIT3Q15649 155 aaPredicted RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 UGCGQ16739 394 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 TMEM154Q6P9G4 183 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 DSELQ8IZU8 1212 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 C12orf50Q8NA57 414 aaPredicted RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 ATAD1Q8NBU5 361 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 GLIS3Q8NEA6 775 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 ETNPPLQ8TBG4 499 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 RNF157Q96PX1 679 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 FERD3LQ96RJ6 166 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 ROGDIQ9GZN7 287 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 NRDE2Q9H7Z3 1164 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 SEMA4BQ9NPR2 832 aaPredicted RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 AGO1Q9UL18 857 aaKnown RBP6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 LZTS1Q9Y250 596 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 DERAQ9Y315 318 aa6.46□□□□□ -1.37
UBQLN1-206ENST00000533705 CNTNAP1P78357 1384 aa6.46□□□□□ -1.38
UBQLN1-206ENST00000533705 CHADO15335 359 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms