RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 NKD2Q969F2 451 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-205ENST00000533464 NTPCRQ9BSD7 190 aaKnown RBP17.78■□□□□ 0.44
PHRF1-205ENST00000533464 IL1RAPL1Q9NZN1 696 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 KPNA3O00505 521 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-205ENST00000533464 SERPINA4P29622 427 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 GRK3P35626 688 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 CLCN5P51795 746 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 SP3Q02447 781 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 PLD5Q8N7P1 536 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 PTGR2Q8N8N7 351 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-205ENST00000533464 TFAP2BQ92481 460 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 NDRG1Q92597 394 aaKnown RBP17.78■□□□□ 0.44
PHRF1-205ENST00000533464 MECRQ9BV79 373 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 TM6SF2Q9BZW4 377 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 COPS7BQ9H9Q2 264 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-205ENST00000533464 RNPEPL1Q9HAU8 725 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 SLC17A7Q9P2U7 560 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 ZNF214Q9UL59 606 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-205ENST00000533464 PCDHGC3Q9UN70 934 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 TREHO43280 583 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 HDCP19113 662 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 POU1F1P28069 291 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 RAD23AP54725 363 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 FAM98BQ52LJ0 330 aaKnown RBP17.78■□□□□ 0.44
PHRF1-205ENST00000533464 DEPDC1Q5TB30 811 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 PMF1Q6P1K2 205 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 ATG16L2Q8NAA4 619 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 SERAC1Q96JX3 654 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 MLPHQ9BV36 600 aaPredicted RBP17.78■□□□□ 0.44
PHRF1-205ENST00000533464 MIEF1Q9NQG6 463 aa17.78■□□□□ 0.44
PHRF1-205ENST00000533464 FGFR1P11362 822 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 FECHP22830 423 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 NEK2P51955 445 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 CCL23P55773 120 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 TUSC3Q13454 348 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 IL27RAQ6UWB1 636 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 PACS1Q6VY07 963 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 GPR152Q8TDT2 470 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 MAN1C1Q9NR34 630 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 SNX15Q9NRS6 342 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 OPTCQ9UBM4 332 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.44
PHRF1-205ENST00000533464 TSPAN1O60635 241 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 WDR47O94967 919 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 OCM2P0CE71 109 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 OCMP0CE72 109 aaPredicted RBP17.77■□□□□ 0.44
PHRF1-205ENST00000533464 RAB10P61026 200 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 CMC1Q7Z7K0 106 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 APLFQ8IW19 511 aaPredicted RBP17.77■□□□□ 0.44
PHRF1-205ENST00000533464 EXOC2Q96KP1 924 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 MARK4Q96L34 752 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 WDR41Q9HAD4 459 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 TMCC3Q9ULS5 477 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 VPS4BO75351 444 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 ZMPSTE24O75844 475 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 SPATA6LQ8N4H0 392 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 AGAP11Q8TF27 550 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 ARL15Q9NXU5 204 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 PADI4Q9UM07 663 aa17.77■□□□□ 0.44
PHRF1-205ENST00000533464 IFRD1O00458 451 aaPredicted RBP17.77■□□□□ 0.43
PHRF1-205ENST00000533464 ADCY6O43306 1168 aa17.77■□□□□ 0.43
PHRF1-205ENST00000533464 EDF1O60869 148 aaKnown RBP17.77■□□□□ 0.43
PHRF1-205ENST00000533464 PSMG1O95456 288 aa17.77■□□□□ 0.43
PHRF1-205ENST00000533464 PAX3P23760 479 aa17.77■□□□□ 0.43
PHRF1-205ENST00000533464 ABL2P42684 1182 aa17.77■□□□□ 0.43
PHRF1-205ENST00000533464 RFX3P48380 749 aa17.77■□□□□ 0.43
PHRF1-205ENST00000533464 PCYT1AP49585 367 aa17.77■□□□□ 0.43
PHRF1-205ENST00000533464 NUP107P57740 925 aa17.77■□□□□ 0.43
PHRF1-205ENST00000533464 MRPS22P82650 360 aaKnown RBP17.77■□□□□ 0.43
PHRF1-205ENST00000533464 PPM1LQ5SGD2 360 aa17.77■□□□□ 0.43
PHRF1-205ENST00000533464 STXBP5Q5T5C0 1151 aa17.77■□□□□ 0.43
PHRF1-205ENST00000533464 ZFP1Q6P2D0 407 aa17.77■□□□□ 0.43
PHRF1-205ENST00000533464 TSPAN18Q96SJ8 248 aa17.77■□□□□ 0.43
PHRF1-205ENST00000533464 ITM2BQ9Y287 266 aa17.77■□□□□ 0.43
PHRF1-205ENST00000533464 FAM58BPP0C7Q3 252 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 FLT3LGP49771 235 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 QPCTQ16769 361 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 TRIM60Q495X7 471 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 SLC4A11Q8NBS3 891 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 FTHL17Q9BXU8 183 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 DDX28Q9NUL7 540 aaKnown RBP17.76■□□□□ 0.43
PHRF1-205ENST00000533464 TLR5O60602 858 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 ANXA11P50995 505 aaKnown RBP17.76■□□□□ 0.43
PHRF1-205ENST00000533464 POLR2LP62875 67 aaKnown RBP17.76■□□□□ 0.43
PHRF1-205ENST00000533464 MBTD1Q05BQ5 628 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 CRY1Q16526 586 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 MON1AQ86VX9 555 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 TRPC4APQ8TEL6 797 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 CPT1BQ92523 772 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 RNF145Q96MT1 663 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 BDH2Q9BUT1 245 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 ASB8Q9H765 288 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 LBPP18428 481 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 WNT3AP56704 352 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 FAM45BPQ6NSW5 357 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 PIWIL4Q7Z3Z4 852 aaKnown RBP17.76■□□□□ 0.43
PHRF1-205ENST00000533464 NKAPQ8N5F7 415 aaKnown RBP17.76■□□□□ 0.43
PHRF1-205ENST00000533464 FAM45AQ8TCE6 357 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 XPR1Q9UBH6 696 aa17.76■□□□□ 0.43
PHRF1-205ENST00000533464 ALDH1A2O94788 518 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms