RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TAZQ16635 292 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 IFI16Q16666 785 aaKnown RBP12.21□□□□□ -0.45
SSBP3-214ENST00000533209 PLK5Q496M5 336 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 MFSD7Q6UXD7 560 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 CEP68Q76N32 757 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 NT5DC3Q86UY8 548 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 KBTBD6Q86V97 674 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 MMAAQ8IVH4 418 aaKnown RBP12.21□□□□□ -0.45
SSBP3-214ENST00000533209 KATNAL2Q8IYT4 538 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 RNF10Q8N5U6 811 aaKnown RBP12.21□□□□□ -0.45
SSBP3-214ENST00000533209 CASKIN2Q8WXE0 1202 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 OR8D1Q8WZ84 308 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 TSGA10Q9BZW7 698 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 KCNF1Q9H3M0 494 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 UBA2Q9UBT2 640 aaPredicted RBP12.21□□□□□ -0.45
SSBP3-214ENST00000533209 IPO11Q9UI26 975 aaKnown RBP12.21□□□□□ -0.45
SSBP3-214ENST00000533209 SARDHQ9UL12 918 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 CYP8B1Q9UNU6 501 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 CAPN6Q9Y6Q1 641 aa12.21□□□□□ -0.45
SSBP3-214ENST00000533209 RNF103O00237 685 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 KRT86O43790 486 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 DNTTP04053 509 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 CTSLP07711 333 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 CTNNA2P26232 953 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 CDKN2BP42772 138 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 PSMD8P48556 350 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 PEX5P50542 639 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 DNA2P51530 1060 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 SLC10A2Q12908 348 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-214ENST00000533209 CYTH1Q15438 398 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 CST6Q15828 149 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 CARD16Q5EG05 197 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 SLC9A4Q6AI14 798 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 SPOCD1Q6ZMY3 1216 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 DPY19L3Q6ZPD9 716 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 PRR23BQ6ZRT6 265 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 ZNF662Q6ZS27 426 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 DSG4Q86SJ6 1040 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 PLPP6Q8IY26 295 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 PLD5Q8N7P1 536 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 CHST14Q8NCH0 376 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 NKD2Q969F2 451 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-214ENST00000533209 VOPP1Q96AW1 172 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 ZC3H10Q96K80 434 aaKnown RBP12.2□□□□□ -0.46
SSBP3-214ENST00000533209 SPACA7Q96KW9 195 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 CCDC114Q96M63 670 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 TM6SF2Q9BZW4 377 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 DUSP15Q9H1R2 295 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-214ENST00000533209 PABPC3Q9H361 631 aaKnown RBP12.2□□□□□ -0.46
SSBP3-214ENST00000533209 WSB2Q9NYS7 404 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-214ENST00000533209 PPM1HQ9ULR3 514 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 GUCA1BQ9UMX6 200 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 SCML1Q9UN30 329 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 SMG5Q9UPR3 1016 aaKnown RBP12.2□□□□□ -0.46
SSBP3-214ENST00000533209 PPP2R2CQ9Y2T4 447 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-214ENST00000533209 PCDHA3Q9Y5H8 950 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 WASF2Q9Y6W5 498 aa12.2□□□□□ -0.46
SSBP3-214ENST00000533209 CCDC66A2RUB6 948 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 MID1O15344 667 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 MAFKO60675 156 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 ZRANB2O95218 330 aaKnown RBP eCLIP12.19□□□□□ -0.46
SSBP3-214ENST00000533209 MAP3K6O95382 1288 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 FTCDO95954 541 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 PEX11BO96011 259 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 ADH1BP00325 375 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 GSRP00390 522 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 IL1BP01584 269 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 LMNAP02545 664 aaKnown RBP12.19□□□□□ -0.46
SSBP3-214ENST00000533209 PTMAP06454 111 aaKnown RBP12.19□□□□□ -0.46
SSBP3-214ENST00000533209 CD6P30203 668 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 CHRNA3P32297 505 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 SLC8A1P32418 973 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 RECQLP46063 649 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-214ENST00000533209 CCNHP51946 323 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-214ENST00000533209 METAP1P53582 386 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 GBE1Q04446 702 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 IL10RBQ08334 325 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 GALNT2Q10471 571 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 LPAL2Q16609 132 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 TTC31Q49AM3 519 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-214ENST00000533209 ODF2Q5BJF6 829 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 ATXN7L2Q5T6C5 722 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-214ENST00000533209 PMS2CLQ68D20 193 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 PEX26Q7Z412 305 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 C11orf74Q86VG3 221 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 RFX6Q8HWS3 928 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 LRRC49Q8IUZ0 686 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 RCOR2Q8IZ40 523 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 SYCE1Q8N0S2 351 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 AADATQ8N5Z0 425 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 TMIEQ8NEW7 156 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 OR2AP1Q8NGE2 309 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 EXD1Q8NHP7 514 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 PIP4K2CQ8TBX8 421 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 ALG3Q92685 438 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 ZNF830Q96NB3 372 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-214ENST00000533209 ZNF599Q96NL3 588 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 HEPHQ9BQS7 1158 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 SP110Q9HB58 689 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms