RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 ZDHHC9Q9Y397 364 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 OR51B4Q9Y5P0 310 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 U3KQA8 63 aa13.34□□□□□ -0.27
COPB1-209ENST00000533096 PLXNA2O75051 1894 aa13.33□□□□□ -0.27
COPB1-209ENST00000533096 A0A1W2PNU3 283 aaPredicted RBP13.33□□□□□ -0.28
COPB1-209ENST00000533096 FAM170AA1A519 330 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 M0QYT0 321 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 RAD51BO15315 384 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 PAGE1O75459 146 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 CLDN11O75508 207 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 LEFTY1O75610 366 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 ADCY5O95622 1261 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 IGLV3-25P01717 112 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 PRNPP04156 253 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 JUNDP17535 347 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 RNASE9P60153 205 aaKnown RBP13.33□□□□□ -0.28
COPB1-209ENST00000533096 LRRC63Q05C16 580 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 NFATC3Q12968 1075 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 TFAP2DQ7Z6R9 452 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 ABI3BPQ7Z7G0 1075 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 PASD1Q8IV76 773 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 RYBPQ8N488 228 aaPredicted RBP13.33□□□□□ -0.28
COPB1-209ENST00000533096 ZNF548Q8NEK5 533 aaPredicted RBP13.33□□□□□ -0.28
COPB1-209ENST00000533096 SMARCE1Q969G3 411 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 CCDC97Q96F63 343 aaPredicted RBP13.33□□□□□ -0.28
COPB1-209ENST00000533096 PPP1R13BQ96KQ4 1090 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 TRIM4Q9C037 500 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 FAM117AQ9C073 453 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.28
COPB1-209ENST00000533096 INTS2Q9H0H0 1204 aaKnown RBP13.33□□□□□ -0.28
COPB1-209ENST00000533096 IL36AQ9UHA7 158 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 VPS51Q9UID3 782 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 KLF15Q9UIH9 416 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 ENTPD2Q9Y5L3 495 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 HEMK1Q9Y5R4 338 aaPredicted RBP13.33□□□□□ -0.28
COPB1-209ENST00000533096 HS3ST3A1Q9Y663 406 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 COL5A1P20908 1838 aaPredicted RBP13.33□□□□□ -0.28
COPB1-209ENST00000533096 KNTC1P50748 2209 aa13.33□□□□□ -0.28
COPB1-209ENST00000533096 A0A0D9SEW6 157 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 IGLON5A6NGN9 336 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 H3BM21 787 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 K7ENP7 123 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 NEMP1O14524 444 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 SRGAP2O75044 1071 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 CSF2P04141 144 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
COPB1-209ENST00000533096 ADKP55263 362 aaKnown RBP13.32□□□□□ -0.28
COPB1-209ENST00000533096 CDH4P55283 916 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 RPS21P63220 83 aaKnown RBP13.32□□□□□ -0.28
COPB1-209ENST00000533096 GCNT1Q02742 428 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 EIF4EBP2Q13542 120 aaPredicted RBP13.32□□□□□ -0.28
COPB1-209ENST00000533096 PDE1CQ14123 709 aaPredicted RBP13.32□□□□□ -0.28
COPB1-209ENST00000533096 FGL2Q14314 439 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 NR0B2Q15466 257 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 ARHGAP44Q17R89 818 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 ALFQ53S48 1182 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 EFHC1Q5JVL4 640 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 ZCCHC8Q6NZY4 707 aaKnown RBP13.32□□□□□ -0.28
COPB1-209ENST00000533096 INO80CQ6PI98 192 aaPredicted RBP13.32□□□□□ -0.28
COPB1-209ENST00000533096 RBM44Q6ZP01 1051 aaKnown RBP13.32□□□□□ -0.28
COPB1-209ENST00000533096 DPY19L3Q6ZPD9 716 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 DCP2Q8IU60 420 aaKnown RBP13.32□□□□□ -0.28
COPB1-209ENST00000533096 ARL14Q8N4G2 192 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 WDTC1Q8N5D0 677 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 IFT43Q96FT9 208 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 GSDMAQ96QA5 445 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 PSMB7Q99436 277 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 C2orf49Q9BVC5 232 aaPredicted RBP13.32□□□□□ -0.28
COPB1-209ENST00000533096 WDCPQ9H6R7 721 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 USP29Q9HBJ7 922 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 MPP6Q9NZW5 540 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 GULP1Q9UBP9 304 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 TBC1D30Q9Y2I9 924 aa13.32□□□□□ -0.28
COPB1-209ENST00000533096 HELZ2Q9BYK8 2649 aaKnown RBP13.32□□□□□ -0.28
COPB1-209ENST00000533096 MUC22E2RYF6 1773 aaPredicted RBP13.32□□□□□ -0.28
COPB1-209ENST00000533096 SPTY2D1-AS1A0A0U1RR47 76 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 GOLGA6L4A6NEF3 574 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 FPGTO14772 594 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 PSMA7O14818 248 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 AQP9O43315 295 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 CD44P16070 742 aaKnown RBP13.31□□□□□ -0.28
COPB1-209ENST00000533096 GNA15P30679 374 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 STX17P56962 302 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 PDCLQ13371 301 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 STIM1Q13586 685 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 TCEA2Q15560 299 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 PERM1Q5SV97 790 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 C6orf132Q5T0Z8 1188 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 FAXCQ5TGI0 409 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 GJB7Q6PEY0 223 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 JAMLQ86YT9 394 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 OR7D4Q8NG98 312 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 PRR11Q96HE9 360 aaPredicted RBP13.31□□□□□ -0.28
COPB1-209ENST00000533096 DHTKD1Q96HY7 919 aaPredicted RBP13.31□□□□□ -0.28
COPB1-209ENST00000533096 PPP1R16AQ96I34 528 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 CEP63Q96MT8 703 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 CPXM1Q96SM3 734 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 ARHGAP9Q9BRR9 750 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 HDAC8Q9BY41 377 aa13.31□□□□□ -0.28
COPB1-209ENST00000533096 TKTL2Q9H0I9 626 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms