RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 TAS2R40P59535 323 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 SLC25A11Q02978 314 aaKnown RBP13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 ELAVL3Q14576 367 aaKnown RBP13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 CA9Q16790 459 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 FAM72AQ5TYM5 149 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 FAM72DQ6L9T8 149 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 C11orf63Q6NUN7 778 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 FAM72BQ86X60 149 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 PSTKQ8IV42 348 aaKnown RBP13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 DEFB119Q8N690 84 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 DCAF4L2Q8NA75 395 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 KCTD6Q8NC69 237 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 TEKT4Q8WW24 435 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 RPL10LQ96L21 214 aaKnown RBP13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 KCTD15Q96SI1 283 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 BTBD1Q9H0C5 482 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 PABPC3Q9H361 631 aaKnown RBP13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 GOLPH3Q9H4A6 298 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 MTG2Q9H4K7 406 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 TMEM9BQ9NQ34 198 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 SLC25A13Q9UJS0 675 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 VPS28Q9UK41 221 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 FZD4Q9ULV1 537 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 NCKAP1Q9Y2A7 1128 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 ALG6Q9Y672 507 aa13.24□□□□□ -0.29
TRAPPC4-212ENST00000533058 DNAH14Q0VDD8 3507 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 DCDC2BA2VCK2 349 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 C10orf142B7Z368 130 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 H3BRJ5 948 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 ALOX15BO15296 676 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 ZSCAN12O43309 604 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 ADH1BP00325 375 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 KRT1P04264 644 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 RHOCP08134 193 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 OR1E1P30953 314 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 ACSL1P33121 698 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 STK19P49842 368 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 CLCN6P51797 869 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 SLC20A2Q08357 652 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 CST6Q15828 149 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 TXNRD3NBQ6F5E7 133 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 RHOT1Q8IXI2 618 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 SYCE1Q8N0S2 351 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 SH2D3CQ8N5H7 860 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 C1orf216Q8TAB5 229 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 KIAA1524Q8TCG1 905 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 FAM131CQ96AQ9 280 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 PSMB7Q99436 277 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 MUC3BQ9H195 1237 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 CATSPERBQ9H7T0 1116 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 KLHL11Q9NVR0 708 aa13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 TPX2Q9ULW0 747 aaKnown RBP13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 TNRC6BQ9UPQ9 1833 aaKnown RBP13.23□□□□□ -0.29
TRAPPC4-212ENST00000533058 A0A1B0GTW7 788 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 LRRD1A4D1F6 860 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 MEI4A8MW99 385 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 ARHGAP33O14559 1287 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 MCF2LO15068 1137 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 PALMO75781 387 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 SEMA4FO95754 770 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 SYPP08247 313 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 RHOQP17081 205 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 ENGP17813 658 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 C5AR1P21730 350 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 SLC8A1P32418 973 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 ETFBP38117 255 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 MAPKAPK2P49137 400 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 DLG2Q15700 870 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 ATP13A4Q4VNC1 1196 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 DCAF12L1Q5VU92 463 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 CYP4V2Q6ZWL3 525 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 PEX26Q7Z412 305 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 DSG4Q86SJ6 1040 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 NLRP14Q86W24 1093 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 ZNF354CQ86Y25 554 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 MAP7D3Q8IWC1 876 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 RGL4Q8IZJ4 473 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 RNF10Q8N5U6 811 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 ALS2CR12Q96Q35 445 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 CALN1Q9BXU9 219 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 ZDHHC5Q9C0B5 715 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 TRMT1Q9NXH9 659 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 FBXL12Q9NXK8 326 aa13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRAPPC4-212ENST00000533058 ATXN2Q99700 1313 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 A0A0D9SEW6 157 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 GRID2IPA4D2P6 1211 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 C4orf47A7E2U8 309 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 UPK3BL1B0FP48 263 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 UPK3BL2E5RIL1 263 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 MID1O15344 667 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 FGF10O15520 208 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 PSTPIP1O43586 416 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 ZMPSTE24O75844 475 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 FTCDO95954 541 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 CFIP05156 583 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 SRCP12931 536 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 GOT1P17174 413 aa13.21□□□□□ -0.29
TRAPPC4-212ENST00000533058 HTR7P34969 479 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms