RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 NFKB2Q00653 900 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 CCDC15Q0P6D6 951 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 EIF4EBP2Q13542 120 aaPredicted RBP12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 DEFB133Q30KQ1 61 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 TMEM259Q4ZIN3 620 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 COLEC12Q5KU26 742 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 PERM1Q5SV97 790 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 KYAT3Q6YP21 454 aaKnown RBP12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 TMIEQ8NEW7 156 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 RNF34Q969K3 372 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 RPRD1AQ96P16 312 aaPredicted RBP12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 NT5C1BQ96P26 610 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 TRIM62Q9BVG3 475 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 POPDC2Q9HBU9 364 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 DYRK4Q9NR20 520 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 NCKIPSDQ9NZQ3 722 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 KLF15Q9UIH9 416 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 SALL4Q9UJQ4 1053 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 HS3ST2Q9Y278 367 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 CSNK1G3Q9Y6M4 447 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 MYO9AB2RTY4 2548 aa12.92□□□□□ -0.34
AP004550.1-201ENST00000532652 ESPL1Q14674 2120 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 SYNJ2BP-COX16A0A087WUM0 186 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 CCDC187A0A096LP49 1063 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 SPTY2D1-AS1A0A0U1RR47 76 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 MUSKO15146 869 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 SLC16A3O15427 465 aaKnown RBP12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 AQP9O43315 295 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 PRNPP04156 253 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 ACADSBP45954 432 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 NDUFA8P51970 172 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 PDX1P52945 283 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 MAPK8IP2Q13387 824 aaPredicted RBP12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 FGL2Q14314 439 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 ERN2Q76MJ5 926 aaKnown RBP12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 PARGQ86W56 976 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 PPM1KQ8N3J5 372 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 CHST14Q8NCH0 376 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 OR2A12Q8NGT7 310 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 LMX1AQ8TE12 382 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 SLC35C1Q96A29 364 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 CCDC114Q96M63 670 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 SLC17A9Q9BYT1 436 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 FAM204AQ9H8W3 233 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 COX16Q9P0S2 106 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 ATXN7L1Q9ULK2 861 aaPredicted RBP12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 VANGL2Q9ULK5 521 aa12.91□□□□□ -0.34
AP004550.1-201ENST00000532652 E5RJQ4 531 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 K7ERQ8 282 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 RIOK3O14730 519 aaKnown RBP12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 RAD51BO15315 384 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 SMAD6O43541 496 aaKnown RBP12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 SNAP91O60641 907 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 PAK4O96013 591 aaPredicted RBP12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 ITGA2BP08514 1039 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 JUNDP17535 347 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 ITGB6P18564 788 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 RRM1P23921 792 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 GGCXP38435 758 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 FMO5P49326 533 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 YWHAZP63104 245 aaKnown RBP12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 AUHQ13825 339 aaKnown RBP12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 PKP1Q13835 747 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 PDE1CQ14123 709 aaPredicted RBP12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 NR0B2Q15466 257 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 TAF5Q15542 800 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 ARSIQ5FYB1 569 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 DENND1BQ6P3S1 775 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 ATG14Q6ZNE5 492 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 KRBA2Q6ZNG9 492 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 USP53Q70EK8 1073 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 ATP11CQ8NB49 1132 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 GRIN3AQ8TCU5 1115 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 EXTL1Q92935 676 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 PSMB7Q99436 277 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 IL12RB2Q99665 862 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 ARHGAP9Q9BRR9 750 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 SLC4A5Q9BY07 1137 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 HDAC8Q9BY41 377 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 MUC3BQ9H195 1237 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 STARD5Q9NSY2 213 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 DDIT4Q9NX09 232 aa12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 ARMCX3Q9UH62 379 aaPredicted RBP12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 IPO11Q9UI26 975 aaKnown RBP12.9□□□□□ -0.34
AP004550.1-201ENST00000532652 SPENQ96T58 3664 aaKnown RBP12.9□□□□□ -0.35
AP004550.1-201ENST00000532652 FAM237AA0A1B0GTK4 181 aa12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 TPP1O14773 563 aa12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 SPINT1O43278 529 aa12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 GJB6O95452 261 aa12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 SLC2A3P11169 496 aa12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 CCR1P32246 355 aa12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 PRCPP42785 496 aa12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 RABIFP47224 123 aa12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 RPS21P63220 83 aaKnown RBP12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 KRT83P78385 493 aa12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 FKBP3Q00688 224 aaKnown RBP12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 SRSF6Q13247 344 aaKnown RBP12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 SPIDRQ14159 915 aa12.89□□□□□ -0.35
AP004550.1-201ENST00000532652 TPRG1LQ5T0D9 272 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms