RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 XPR1Q9UBH6 696 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 SFMBT1Q9UHJ3 866 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 PSMD12O00232 456 aaPredicted RBP15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 CCNT2O60583 730 aaKnown RBP15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 CREB1P16220 341 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 TFEBP19484 476 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 WNT3AP56704 352 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 HECTD3Q5T447 861 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 ARMC12Q5T9G4 340 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 DHFR2Q86XF0 187 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 ECHDC2Q86YB7 292 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 TMEM192Q8IY95 271 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 STAG3L4Q8TBR4 150 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 SPOCK2Q92563 424 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 DPEP3Q9H4B8 488 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 RHOJQ9H4E5 214 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 FAM155BO75949 473 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 GUCA1CO95843 209 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 CLPTM1O96005 669 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 CRHR1P34998 444 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 CERCAMQ5T4B2 595 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 SDHAF4Q5VUM1 108 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 ARHGAP17Q68EM7 881 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 FAM45BPQ6NSW5 357 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 CLNKQ7Z7G1 428 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 C10orf107Q8IVU9 208 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 PCDH19Q8TAB3 1148 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 FAM45AQ8TCE6 357 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 MRPL57Q9BQC6 102 aaKnown RBP15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 CIPCQ9C0C6 399 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 GLOD4Q9HC38 313 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 SSU72Q9NP77 194 aaKnown RBP15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 RABGEF1Q9UJ41 708 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 ATP11BQ9Y2G3 1177 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 PCDHB12Q9Y5F1 795 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 ZSCAN9O15535 394 aaPredicted RBP15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 SYNCRIPO60506 623 aaKnown RBP15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 PAGE1O75459 146 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 C2P06681 752 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 MAXP61244 160 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 MAP3K10Q02779 954 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 BCL2L1Q07817 233 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 LIPMQ5VYY2 423 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 ANKS3Q6ZW76 656 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 STK40Q8N2I9 435 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 OTUB1Q96FW1 271 aaPredicted RBP15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 WDR41Q9HAD4 459 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 PARVBQ9HBI1 364 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 DNMT3LQ9UJW3 386 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 ZNF180Q9UJW8 692 aa15.51■□□□□ 0.07
PCDHA3-202ENST00000532566 ADCY6O43306 1168 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 GCATO75600 419 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 CFHP08603 1231 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 SLC2A4P14672 509 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 FASP25445 335 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 SERPINB10P48595 397 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 PKNOX1P55347 436 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 IL2P60568 153 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 SLC20A2Q08357 652 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 CCDC15Q0P6D6 951 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 PLD1Q13393 1074 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 NET1Q7Z628 596 aaPredicted RBP15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 PYDC1Q8WXC3 89 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 HIC2Q96JB3 615 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 DACH2Q96NX9 599 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 OSBPL7Q9BZF2 842 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 MPP6Q9NZW5 540 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 LZTS3O60299 673 aaPredicted RBP15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 VPS4BO75351 444 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 LGR5O75473 907 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 LYPLA1O75608 230 aaPredicted RBP15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 ARIH2O95376 493 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 PRKAR2AP13861 404 aaKnown RBP15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 GDF10P55107 478 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 DMC1Q14565 340 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 DDR2Q16832 855 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 PFKFB4Q16877 469 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 IRGCQ6NXR0 463 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 C16orf59Q7L2K0 433 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 ALYREFQ86V81 257 aaKnown RBP15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 FITM2Q8N6M3 262 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 CCDC185Q8N715 623 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 LMO3Q8TAP4 145 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 NDNQ99608 321 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 DPY30Q9C005 99 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 TMEM161AQ9NX61 479 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 IGSF6O95976 241 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 COX4I1P13073 169 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 HALP42357 657 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 CYP51A1Q16850 503 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 INSCQ1MX18 579 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 P3H2Q8IVL5 708 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 OMDQ99983 421 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 KCTD14Q9BQ13 255 aaPredicted RBP15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 MAN1C1Q9NR34 630 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 SCN3BQ9NY72 215 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 MYH7P12883 1935 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 KATNA1O75449 491 aa15.5■□□□□ 0.07
PCDHA3-202ENST00000532566 ZBTB48P10074 688 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms