RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CPQQ9Y646 472 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 FMO4P31512 558 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 HSPA13P48723 471 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 AIF1P55008 147 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 PLIN5Q00G26 463 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 PGS1Q32NB8 556 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 DET1Q7L5Y6 550 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 RAD9AQ99638 391 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 ARHGEF4Q9NR80 690 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 MSI1O43347 362 aaKnown RBP11.45□□□□□ -0.58
PTPRK-221ENST00000532331 RARAP10276 462 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 CAP1Q01518 475 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 KCNMA1Q12791 1236 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 NFYCQ13952 458 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 CENPLQ8N0S6 344 aaPredicted RBP11.45□□□□□ -0.58
PTPRK-221ENST00000532331 ZNF384Q8TF68 577 aa11.45□□□□□ -0.58
PTPRK-221ENST00000532331 WDR27A2RRH5 827 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 KPNA5O15131 536 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 MDM4O15151 490 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 C1RP00736 705 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 KRT6AP02538 564 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 PRNPP04156 253 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 KRT6BP04259 564 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 GNSP15586 552 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 ATP4AP20648 1035 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 KRT6CP48668 564 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 IRGQQ8WZA9 623 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 SH3GL1Q99961 368 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 ARHGAP39Q9C0H5 1083 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 FANCEQ9HB96 536 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 KRCC1Q9NPI7 259 aaPredicted RBP11.44□□□□□ -0.58
PTPRK-221ENST00000532331 ERVW-1Q9UQF0 538 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 DEAF1O75398 565 aaPredicted RBP11.44□□□□□ -0.58
PTPRK-221ENST00000532331 CRABP2P29373 138 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 PBX3P40426 434 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 CCDC153Q494R4 210 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 ATP6AP1LQ52LC2 224 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 KLHL35Q6PF15 583 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 PPP1R10Q96QC0 940 aaKnown RBP11.44□□□□□ -0.58
PTPRK-221ENST00000532331 RPS6KB2Q9UBS0 482 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 L1RE1Q9UN81 338 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 RIPK2O43353 540 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 KRT8P05787 483 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 BGNP21810 368 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 KCNA3P22001 575 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 DGKAP23743 735 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 S100A5P33763 92 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 ALDH9A1P49189 494 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 DGKGP49619 791 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 CHRNB3Q05901 458 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 CSTF3Q12996 717 aaKnown RBP11.44□□□□□ -0.58
PTPRK-221ENST00000532331 BNC2Q6ZN30 1099 aaPredicted RBP11.44□□□□□ -0.58
PTPRK-221ENST00000532331 COLGALT2Q8IYK4 626 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 ZNF784Q8NCA9 323 aaPredicted RBP11.44□□□□□ -0.58
PTPRK-221ENST00000532331 EXOC2Q96KP1 924 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 ACOX2Q99424 681 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 CPNE1Q99829 537 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 HPS4Q9NQG7 708 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 PHPT1Q9NRX4 125 aaPredicted RBP11.44□□□□□ -0.58
PTPRK-221ENST00000532331 SLC27A6Q9Y2P4 619 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 TGFB1I1O43294 461 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 RBL1P28749 1068 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 CYP4F8P98187 520 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 RUNX1T1Q06455 604 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 ELP6Q0PNE2 266 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 TRIM69Q86WT6 500 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 TSTD1Q8NFU3 115 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 AUTS2Q8WXX7 1259 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 FEM1CQ96JP0 617 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 TEPSINQ96N21 525 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 TRMT61BQ9BVS5 477 aaKnown RBP11.44□□□□□ -0.58
PTPRK-221ENST00000532331 SEMA4AQ9H3S1 761 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 ZDHHC4Q9NPG8 344 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.44□□□□□ -0.581e-6■■□□□ 12.2
PTPRK-221ENST00000532331 MPP6Q9NZW5 540 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 GNPTGQ9UJJ9 305 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 PADI4Q9UM07 663 aa11.44□□□□□ -0.58
PTPRK-221ENST00000532331 A0A0U1RQF3 1178 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 KLRC4O43908 158 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 FTH1P02794 183 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 GDI1P31150 447 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 CENPAP49450 140 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 USP4Q13107 963 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 TBX2Q13207 712 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 TMEM63BQ5T3F8 832 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 LYPLAL1Q5VWZ2 237 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 KATNAL2Q8IYT4 538 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 TEX9Q8N6V9 391 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 C1orf127Q8N9H9 656 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 BTN2A2Q8WVV5 523 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 SHC3Q92529 594 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 IL23AQ9NPF7 189 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 PIH1D1Q9NWS0 290 aaKnown RBP11.43□□□□□ -0.58
PTPRK-221ENST00000532331 IMPAD1Q9NX62 359 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 POLG2Q9UHN1 485 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 CRYL1Q9Y2S2 319 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 ARHGEF9O43307 516 aa11.43□□□□□ -0.58
PTPRK-221ENST00000532331 SNAI1O95863 264 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms