RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 ILVBLA1L0T0 632 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 HEATR9A2RTY3 570 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 ZNF840PA6NDX5 716 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 MSI1O43347 362 aaKnown RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 EDF1O60869 148 aaKnown RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 SIN3BO75182 1162 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 MOCS2O96007 188 aaPredicted RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 OAS1P00973 400 aaKnown RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 COL9A1P20849 921 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 TACR2P21452 398 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 SKIV2L2P42285 1042 aaKnown RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 ETV4P43268 484 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 MAGEA9P43362 315 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 SERPINB8P50452 374 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 KPNA2P52292 529 aaKnown RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 USP46P62068 366 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 PDE1BQ01064 536 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 IFT88Q13099 833 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 ZBTB17Q13105 803 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 SERINC3Q13530 473 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 KCTD19Q17RG1 926 aaPredicted RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 RASIP1Q5U651 963 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 FBXL22Q6P050 247 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 PKN3Q6P5Z2 889 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 RANBP10Q6VN20 620 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 PACS1Q6VY07 963 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 CCDC149Q6ZUS6 474 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 TRPM8Q7Z2W7 1104 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 DEFB128Q7Z7B8 93 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 CNTN4Q8IWV2 1026 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 KIRREL3Q8IZU9 778 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 C4orf33Q8N1A6 199 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 AGGF1Q8N302 714 aaeCLIP12.49□□□□□ -0.41
CHD7-211ENST00000532149 ZNF557Q8N988 423 aaPredicted RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 OR52K1Q8NGK4 314 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 MGARPQ8TDB4 240 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 ZNF75CPQ92670 426 aaPredicted RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 IMP4Q96G21 291 aaKnown RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 SRPK1Q96SB4 655 aaKnown RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 PAIP2Q9BPZ3 127 aaKnown RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 ELAC2Q9BQ52 826 aaKnown RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 C19orf43Q9BQ61 176 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 FAM167BQ9BTA0 163 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 POLR1EQ9GZS1 481 aaKnown RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 MANSC1Q9H8J5 431 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 RC3H2Q9HBD1 1191 aaKnown RBP12.49□□□□□ -0.41
CHD7-211ENST00000532149 RXFP1Q9HBX9 757 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 ATP11BQ9Y2G3 1177 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 SLC27A5Q9Y2P5 690 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 RWDD3Q9Y3V2 267 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 NUP205Q92621 2012 aa12.49□□□□□ -0.41
CHD7-211ENST00000532149 SPAG7O75391 227 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 RFPL1O75677 317 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 FSBPO95073 299 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 NEFHP12036 1026 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 RAG1P15918 1043 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 CREB1P16220 341 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 HLA-DPA1P20036 260 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 GRK2P25098 689 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 OR1E1P30953 314 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 ADRA1AP35348 466 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 RASSF2P50749 326 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 RABGGTBP53611 331 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 ASPHQ12797 758 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 LRRC14Q15048 493 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 ADGRF1Q5T601 910 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 ALG1LQ6GMV1 187 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 PRPF39Q86UA1 669 aaKnown RBP12.48□□□□□ -0.41
CHD7-211ENST00000532149 CNTD1Q8N815 330 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 TET1Q8NFU7 2136 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 USP13Q92995 863 aaPredicted RBP12.48□□□□□ -0.41
CHD7-211ENST00000532149 TSNARE1Q96NA8 513 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 CLSTN3Q9BQT9 956 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 MLPHQ9BV36 600 aaPredicted RBP12.48□□□□□ -0.41
CHD7-211ENST00000532149 TRIM55Q9BYV6 548 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 SYBUQ9NX95 663 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 SEPT3Q9UH03 358 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 PRDM4Q9UKN5 801 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 CORO1CQ9ULV4 474 aaPredicted RBP12.48□□□□□ -0.41
CHD7-211ENST00000532149 PHTF1Q9UMS5 762 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 LZTS1Q9Y250 596 aa12.48□□□□□ -0.41
CHD7-211ENST00000532149 A0A1B0GVM2 712 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 TCAF2A6NFQ2 919 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 PRRG1O14668 218 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 PRAMEF11O60813 436 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 UPP2O95045 317 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 VNN2O95498 520 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 ITGA2BP08514 1039 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 ATF6P18850 670 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 GPR15P49685 360 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 HK2P52789 917 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 LIMK2P53671 638 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 PPIGQ13427 754 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHD7-211ENST00000532149 ARTNQ5T4W7 220 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 KIAA0930Q6ICG6 404 aaPredicted RBP12.47□□□□□ -0.41
CHD7-211ENST00000532149 RSPO2Q6UXX9 243 aaPredicted RBP12.47□□□□□ -0.41
CHD7-211ENST00000532149 THSD4Q6ZMP0 1018 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHD7-211ENST00000532149 RASSF3Q86WH2 238 aa12.47□□□□□ -0.41
CHD7-211ENST00000532149 MIB1Q86YT6 1006 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms