RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 CSO75390 466 aaKnown RBP17.72■□□□□ 0.43
PKP3-208ENST00000531857 NEBLO76041 1014 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 PCDH8O95206 1070 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 AKT2P31751 481 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 USP8P40818 1118 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 CDH4P55283 916 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 MARSP56192 900 aaKnown RBP17.72■□□□□ 0.43
PKP3-208ENST00000531857 ARHGAP44Q17R89 818 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 OR6B2Q6IFH4 312 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 OLFML1Q6UWY5 402 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 LINGO4Q6UY18 593 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 Q6ZSR6 202 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 ABI3BPQ7Z7G0 1075 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 ELOA2Q8IYF1 753 aaPredicted RBP17.72■□□□□ 0.43
PKP3-208ENST00000531857 TMIEQ8NEW7 156 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 GRIN3AQ8TCU5 1115 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 COL26A1Q96A83 441 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 DEPDC7Q96QD5 511 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 PIGVQ9NUD9 493 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 NLGN3Q9NZ94 848 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 HOOK1Q9UJC3 728 aaKnown RBP17.72■□□□□ 0.43
PKP3-208ENST00000531857 FARP1Q9Y4F1 1045 aaPredicted RBP17.72■□□□□ 0.43
PKP3-208ENST00000531857 COL6A6A6NMZ7 2263 aa17.72■□□□□ 0.43
PKP3-208ENST00000531857 A0A0D9SEW6 157 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 K7ESM1 405 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 M0QYT0 321 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 ERVH48-1M5A8F1 160 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 DXOO77932 396 aaKnown RBP17.71■□□□□ 0.43
PKP3-208ENST00000531857 ADCY5O95622 1261 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 ERBB2P04626 1255 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 TFE3P19532 575 aaPredicted RBP17.71■□□□□ 0.43
PKP3-208ENST00000531857 PPP1R2P41236 205 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 KRT83P78385 493 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 FGL2Q14314 439 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 TMEM259Q4ZIN3 620 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 ARSIQ5FYB1 569 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 ARHGAP40Q5TG30 622 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 FOXR2Q6PJQ5 311 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 C11orf57Q6ZUT1 292 aaPredicted RBP17.71■□□□□ 0.43
PKP3-208ENST00000531857 ERN2Q76MJ5 926 aaKnown RBP17.71■□□□□ 0.43
PKP3-208ENST00000531857 ZNF683Q8IZ20 524 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 BMFQ96LC9 184 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 SRRTQ9BXP5 876 aaKnown RBP17.71■□□□□ 0.43
PKP3-208ENST00000531857 TNKS2Q9H2K2 1166 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 DNAJC28Q9NX36 388 aa17.71■□□□□ 0.43
PKP3-208ENST00000531857 BICDL2A1A5D9 508 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 POM121BA6NF01 834 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 BIN1O00499 593 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 SCAMP1O15126 338 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 DAB1O75553 588 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 ENDOD1O94919 500 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 GNA14O95837 355 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 PRNPP04156 253 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 GP1BAP07359 652 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 RHOCP08134 193 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 SLC9A1P19634 815 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 LSSP48449 732 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 TMPRSS3P57727 454 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 MORC3Q14149 939 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 TAF1BQ53T94 588 aaPredicted RBP17.7■□□□□ 0.42
PKP3-208ENST00000531857 TRIM65Q6PJ69 517 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 SASS6Q6UVJ0 657 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 ENOSF1Q7L5Y1 443 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 PTAR1Q7Z6K3 402 aaPredicted RBP17.7■□□□□ 0.42
PKP3-208ENST00000531857 FAM181AQ8N9Y4 354 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 C1orf131Q8NDD1 294 aaKnown RBP17.7■□□□□ 0.42
PKP3-208ENST00000531857 IFT43Q96FT9 208 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 CCDC114Q96M63 670 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 C2orf49Q9BVC5 232 aaPredicted RBP17.7■□□□□ 0.42
PKP3-208ENST00000531857 HDAC8Q9BY41 377 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 ABCG4Q9H172 646 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 POLR1BQ9H9Y6 1135 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 ASCL3Q9NQ33 180 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 DYRK4Q9NR20 520 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 TMPRSS4Q9NRS4 437 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 GPR27Q9NS67 375 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 IL36AQ9UHA7 158 aa17.7■□□□□ 0.42
PKP3-208ENST00000531857 A0A1W2PNU3 283 aaPredicted RBP17.69■□□□□ 0.42
PKP3-208ENST00000531857 A6NNZ2 444 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 RAD51BO15315 384 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 ZNF821O75541 412 aaPredicted RBP17.69■□□□□ 0.42
PKP3-208ENST00000531857 LEFTY1O75610 366 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 ALPPL2P10696 532 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 NOS2P35228 1153 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 SLC6A3Q01959 620 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 CCDC15Q0P6D6 951 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 MTA1Q13330 715 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 MAPK8IP2Q13387 824 aaPredicted RBP17.69■□□□□ 0.42
PKP3-208ENST00000531857 FZD2Q14332 565 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 PTPN20Q4JDL3 420 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 ARTNQ5T4W7 220 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 BROXQ5VW32 411 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 C22orf39Q6P5X5 142 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 DPY19L3Q6ZPD9 716 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 SLC26A9Q7LBE3 791 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 LSMEM2Q8N112 164 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 IFI44Q8TCB0 444 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 KCNE4Q8WWG9 221 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 NPY6RQ99463 290 aa17.69■□□□□ 0.42
PKP3-208ENST00000531857 SEMA4CQ9C0C4 833 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms