RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ANOS1P23352 680 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 CLCNKBP51801 687 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 ALDH18A1P54886 795 aaKnown RBP4.66□□□□□ -1.66
PTPRK-220ENST00000531466 SF3A3Q12874 501 aaKnown RBP eCLIP4.66□□□□□ -1.661e-6■■■■□ 21.5
PTPRK-220ENST00000531466 C14orf177Q52M58 125 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 XKR9Q5GH70 373 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 ARL6IP4Q66PJ3 421 aaKnown RBP4.66□□□□□ -1.66
PTPRK-220ENST00000531466 TEX45Q8NA69 505 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 TTC8Q8TAM2 541 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 ZNF566Q969W8 418 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 TMEM18Q96B42 140 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 GFRA4Q9GZZ7 299 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 NECTIN3Q9NQS3 549 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 STARD7Q9NQZ5 370 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 DDX21Q9NR30 783 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTPRK-220ENST00000531466 NFU1Q9UMS0 254 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 CNTN6Q9UQ52 1028 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 NFS1Q9Y697 457 aa4.66□□□□□ -1.66
PTPRK-220ENST00000531466 A0A0U1RQJ8 604 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 DDTLA6NHG4 134 aaPredicted RBP4.65□□□□□ -1.67
PTPRK-220ENST00000531466 NCK2O43639 380 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 EEF1GP26641 437 aaKnown RBP4.65□□□□□ -1.67
PTPRK-220ENST00000531466 RCAN1P53805 252 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 OAZ1P54368 228 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 ATP12AP54707 1039 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 ERVK11-1P61568 191 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 RAB30Q15771 203 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 CCDC6Q16204 474 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 GDPD4Q6W3E5 623 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 MARK2Q7KZI7 788 aaKnown RBP4.65□□□□□ -1.67
PTPRK-220ENST00000531466 SERPINA11Q86U17 422 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 TRIM74Q86UV6 250 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 TRIM73Q86UV7 250 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 ZDHHC23Q8IYP9 409 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 VPS52Q8N1B4 723 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 ZNF485Q8NCK3 441 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 IPO4Q8TEX9 1081 aaKnown RBP4.65□□□□□ -1.67
PTPRK-220ENST00000531466 FAR1Q8WVX9 515 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 TSR2Q969E8 191 aaKnown RBP4.65□□□□□ -1.67
PTPRK-220ENST00000531466 EVA1AQ9H8M9 152 aa4.65□□□□□ -1.67
PTPRK-220ENST00000531466 A0A1B0GVM2 712 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.64□□□□□ -1.67
PTPRK-220ENST00000531466 MBD3L5A6NJ08 208 aaPredicted RBP4.64□□□□□ -1.67
PTPRK-220ENST00000531466 HLA-DQA2P01906 255 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 MMP3P08254 477 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 FCGR2AP12318 317 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 CKMT1AP12532 417 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 SLC5A1P13866 664 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 PHEXP78562 749 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 PLEKHO1Q53GL0 409 aaPredicted RBP4.64□□□□□ -1.67
PTPRK-220ENST00000531466 TRMT1LQ7Z2T5 733 aaKnown RBP4.64□□□□□ -1.67
PTPRK-220ENST00000531466 MAB21L3Q8N8X9 362 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 GPT2Q8TD30 523 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 LRRC8CQ8TDW0 803 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 TTC17Q96AE7 1141 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 FBXO17Q96EF6 278 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 LZTS1Q9Y250 596 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 SLC45A1Q9Y2W3 748 aa4.64□□□□□ -1.67
PTPRK-220ENST00000531466 RNMTO43148 476 aaKnown RBP4.63□□□□□ -1.67
PTPRK-220ENST00000531466 DHX34Q14147 1143 aaKnown RBP4.63□□□□□ -1.67
PTPRK-220ENST00000531466 FCN2Q15485 313 aa4.63□□□□□ -1.67
PTPRK-220ENST00000531466 ZACNQ401N2 412 aa4.63□□□□□ -1.67
PTPRK-220ENST00000531466 MTFR2Q6P444 385 aa4.63□□□□□ -1.67
PTPRK-220ENST00000531466 UNQ6126/PRO20091Q6UXV3 157 aa4.63□□□□□ -1.67
PTPRK-220ENST00000531466 TUBA1AQ71U36 451 aa4.63□□□□□ -1.67
PTPRK-220ENST00000531466 RFWD2Q8NHY2 731 aa4.63□□□□□ -1.67
PTPRK-220ENST00000531466 HDAC7Q8WUI4 952 aa4.63□□□□□ -1.67
PTPRK-220ENST00000531466 SCMH1Q96GD3 660 aa4.63□□□□□ -1.67
PTPRK-220ENST00000531466 TUBA1CQ9BQE3 449 aa4.63□□□□□ -1.67
PTPRK-220ENST00000531466 IFT27Q9BW83 186 aa4.63□□□□□ -1.67
PTPRK-220ENST00000531466 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.63□□□□□ -1.67
PTPRK-220ENST00000531466 PCDHA10Q9Y5I2 948 aa4.63□□□□□ -1.67
PTPRK-220ENST00000531466 A0A1B0GU03 582 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 PIP5K1BO14986 540 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 DNPH1O43598 174 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 DDAH2O95865 285 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 CH25HO95992 272 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 CRYAAP02489 173 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 NPPBP16860 134 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 IFIT5Q13325 482 aaKnown RBP4.62□□□□□ -1.67
PTPRK-220ENST00000531466 SETMARQ53H47 684 aaPredicted RBP4.62□□□□□ -1.67
PTPRK-220ENST00000531466 FAM209BQ5JX69 171 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 PLEKHA7Q6IQ23 1121 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 WDR5BQ86VZ2 330 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 NRSN1Q8IZ57 195 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 WDSUB1Q8N9V3 476 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 HMGB4Q8WW32 186 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 FRG2BQ96QU4 278 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 TRIM31Q9BZY9 425 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 UBTD1Q9HAC8 227 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 CLK4Q9HAZ1 481 aaKnown RBP4.62□□□□□ -1.67
PTPRK-220ENST00000531466 FAM50BQ9Y247 325 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 CEP83Q9Y592 693 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 MST1RQ04912 1400 aa4.62□□□□□ -1.67
PTPRK-220ENST00000531466 TIMM23O14925 209 aa4.61□□□□□ -1.67
PTPRK-220ENST00000531466 FGF18O76093 207 aa4.61□□□□□ -1.67
PTPRK-220ENST00000531466 ATF3P18847 181 aa4.61□□□□□ -1.67
PTPRK-220ENST00000531466 TNFSF4P23510 183 aa4.61□□□□□ -1.67
PTPRK-220ENST00000531466 GSTM2P28161 218 aa4.61□□□□□ -1.67
PTPRK-220ENST00000531466 BTBD16Q32M84 506 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms