RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 LINGO4Q6UY18 593 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 GCNT7Q6ZNI0 430 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 ERN2Q76MJ5 926 aaKnown RBP9.46□□□□□ -0.9
NEDD8-206ENST00000531430 C14orf80Q86SX3 495 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 DCP2Q8IU60 420 aaKnown RBP9.46□□□□□ -0.9
NEDD8-206ENST00000531430 CREBRFQ8IUR6 639 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 ARHGEF19Q8IW93 802 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 SLC22A18ASQ8N1D0 253 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 TMEM145Q8NBT3 493 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 EHBP1Q8NDI1 1231 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 GLMNQ92990 594 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 BMFQ96LC9 184 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 THAP9Q9H5L6 903 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 RMND1Q9NWS8 449 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 IL17BQ9UHF5 180 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 DOLKQ9UPQ8 538 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 ZFR2Q9UPR6 939 aaKnown RBP9.46□□□□□ -0.9
NEDD8-206ENST00000531430 ENTPD2Q9Y5L3 495 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 SNX10Q9Y5X0 201 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 HS3ST3A1Q9Y663 406 aa9.46□□□□□ -0.9
NEDD8-206ENST00000531430 SPTA1P02549 2419 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 RNF103O00237 685 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 FPGTO14772 594 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 CASC3O15234 703 aaKnown RBP9.45□□□□□ -0.9
NEDD8-206ENST00000531430 AQP9O43315 295 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 MED7O43513 233 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 SMAD6O43541 496 aaKnown RBP9.45□□□□□ -0.9
NEDD8-206ENST00000531430 CNTN5O94779 1100 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 RPIAP49247 311 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 RNASE9P60153 205 aaKnown RBP9.45□□□□□ -0.9
NEDD8-206ENST00000531430 FZD2Q14332 565 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 TCEA2Q15560 299 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 PERM1Q5SV97 790 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 FAXCQ5TGI0 409 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 ZNF658Q5TYW1 1059 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-206ENST00000531430 ZCCHC8Q6NZY4 707 aaKnown RBP9.45□□□□□ -0.9
NEDD8-206ENST00000531430 EXD3Q8N9H8 876 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 ZNF548Q8NEK5 533 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-206ENST00000531430 TMIEQ8NEW7 156 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 OR2A12Q8NGT7 310 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 WDR36Q8NI36 951 aaKnown RBP9.45□□□□□ -0.9
NEDD8-206ENST00000531430 SLC35C1Q96A29 364 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 ALG14Q96F25 216 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 PPP1R13BQ96KQ4 1090 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 CCNL2Q96S94 520 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-206ENST00000531430 PRMT1Q99873 361 aaKnown RBP9.45□□□□□ -0.9
NEDD8-206ENST00000531430 USP29Q9HBJ7 922 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 METTL14Q9HCE5 456 aaKnown RBP9.45□□□□□ -0.9
NEDD8-206ENST00000531430 EPB41L5Q9HCM4 733 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 UBE2TQ9NPD8 197 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-206ENST00000531430 IL36AQ9UHA7 158 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 HS3ST4Q9Y661 456 aa9.45□□□□□ -0.9
NEDD8-206ENST00000531430 LY6G6EA0A0G2JKS1 128 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 A0A1W2PNU3 283 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-206ENST00000531430 FAM170AA1A519 330 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 IGLON5A6NGN9 336 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 M0QYT0 321 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 RAD51BO15315 384 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 SRGAP2O75044 1071 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 PAGE1O75459 146 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 CLDN11O75508 207 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 LEFTY1O75610 366 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 CSF2P04141 144 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 ANXA6P08133 673 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 RABIFP47224 123 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 CSRP3P50461 194 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 THOP1P52888 689 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 MCCD1P59942 119 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-206ENST00000531430 RPS21P63220 83 aaKnown RBP9.44□□□□□ -0.9
NEDD8-206ENST00000531430 CLN3Q13286 438 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 SPIDRQ14159 915 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 TGIF1Q15583 401 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 PRRT3Q5FWE3 981 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 EFHC1Q5JVL4 640 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 KLHL10Q6JEL2 608 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 TFAP2DQ7Z6R9 452 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 ABI3BPQ7Z7G0 1075 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 PASD1Q8IV76 773 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 FBXO39Q8N4B4 442 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 ZNF606Q8WXB4 792 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 EXTL1Q92935 676 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 FAM131CQ96AQ9 280 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 IFT43Q96FT9 208 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 PPP1R16AQ96I34 528 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 C2orf49Q9BVC5 232 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-206ENST00000531430 SLC4A5Q9BY07 1137 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 GOLPH3LQ9H4A5 285 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 WDCPQ9H6R7 721 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 SYNCQ9H7C4 482 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 ACP6Q9NPH0 428 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 NCKIPSDQ9NZQ3 722 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 SPASTQ9UBP0 616 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 KLF15Q9UIH9 416 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 SALL4Q9UJQ4 1053 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 U3KQA8 63 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 KIF26BQ2KJY2 2108 aa9.44□□□□□ -0.9
NEDD8-206ENST00000531430 TRPM6Q9BX84 2022 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 CCDC187A0A096LP49 1063 aa9.43□□□□□ -0.9
NEDD8-206ENST00000531430 A0A0D9SEW6 157 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms