RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 TRABD2BA6NFA1 517 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 TMEM191CA6NGB0 347 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 ENDOD1O94919 500 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 GPD1P21695 349 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 SDC4P31431 198 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 PSMD8P48556 350 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 C21orf59P57076 290 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 NME3Q13232 169 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 SHBQ15464 509 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 C15orf59Q2T9L4 293 aaPredicted RBP18.34■□□□□ 0.53
PTPN11-204ENST00000531326 RAB6CQ53S08 254 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 CCDC157Q569K6 752 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 DCUN1D2Q6PH85 259 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 DHRS13Q6UX07 377 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 RAD9BQ6WBX8 426 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 CHSY1Q86X52 802 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 CCDC117Q8IWD4 279 aaPredicted RBP18.34■□□□□ 0.53
PTPN11-204ENST00000531326 GALNT15Q8N3T1 639 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 ELF4Q99607 663 aaPredicted RBP18.34■□□□□ 0.53
PTPN11-204ENST00000531326 OMDQ99983 421 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 TRIM7Q9C029 511 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 RAB6CQ9H0N0 254 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 PIGVQ9NUD9 493 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 COX16Q9P0S2 106 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 SCINQ9Y6U3 715 aa18.34■□□□□ 0.53
PTPN11-204ENST00000531326 LRRC72A6NJI9 287 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 KCNU1A8MYU2 1149 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 EIF3CLB5ME19 914 aaKnown RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 DFNA5O60443 496 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 MOCS3O95396 460 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 APOEP02649 317 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 H2AFZP0C0S5 128 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 VAV1P15498 845 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 CYLC1P35663 651 aaPredicted RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 CXCR3P49682 368 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 ZNF143P52747 638 aaPredicted RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 METAP1P53582 386 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 ADPRHP54922 357 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 ATP11AP98196 1134 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 CYP4F3Q08477 520 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 SFSWAPQ12872 951 aaKnown RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 H2AFVQ71UI9 128 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 PDZD3Q86UT5 571 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 CIR1Q86X95 450 aaPredicted RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 HNRNPLLQ8WVV9 542 aaKnown RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 CENPIQ92674 756 aaPredicted RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 BTN2A3PQ96KV6 586 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 EIF3CQ99613 913 aaKnown RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 PRMT1Q99873 361 aaKnown RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 MRPL47Q9HD33 250 aaKnown RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 FTSJ1Q9UET6 329 aa18.33■□□□□ 0.52
PTPN11-204ENST00000531326 EPN1Q9Y6I3 576 aaPredicted RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 FASNP49327 2511 aaKnown RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 URB1O60287 2271 aaKnown RBP18.33■□□□□ 0.52
PTPN11-204ENST00000531326 SMG1Q96Q15 3661 aaKnown RBP18.32■□□□□ 0.52
PTPN11-204ENST00000531326 IGSF10Q6WRI0 2623 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 CBX4O00257 560 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 CCP110O43303 1012 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 NDUFA10O95299 355 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 TMEM253P0C7T8 217 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 GOT1P17174 413 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 MZF1P28698 734 aaPredicted RBP18.32■□□□□ 0.52
PTPN11-204ENST00000531326 CD38P28907 300 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 DRD3P35462 400 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 CCR5P51681 352 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 DEUP1Q05D60 604 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 SND1Q7KZF4 910 aaKnown RBP eCLIP18.32■□□□□ 0.52
PTPN11-204ENST00000531326 STRADAQ7RTN6 431 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 OR14C36Q8NHC7 312 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 SAP25Q8TEE9 199 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 FNIP1Q8TF40 1166 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 CTNNBL1Q8WYA6 563 aaPredicted RBP18.32■□□□□ 0.52
PTPN11-204ENST00000531326 NUP85Q9BW27 656 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 ANLNQ9NQW6 1124 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 AASDHPPTQ9NRN7 309 aa18.32■□□□□ 0.52
PTPN11-204ENST00000531326 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.32■□□□□ 0.52
PTPN11-204ENST00000531326 DOCK9Q9BZ29 2069 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 F5H5T6 163 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 I6L893 689 aaPredicted RBP18.31■□□□□ 0.52
PTPN11-204ENST00000531326 ADH1BP00325 375 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 F9P00740 461 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 C5AR1P21730 350 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 CCR1P32246 355 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 HDAC4P56524 1084 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 PPP2CBP62714 309 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 PPP2CAP67775 309 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 CDO1Q16878 200 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 INAVAQ3KP66 663 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 SOWAHCQ53LP3 525 aaPredicted RBP18.31■□□□□ 0.52
PTPN11-204ENST00000531326 RNF219Q5W0B1 726 aaPredicted RBP18.31■□□□□ 0.52
PTPN11-204ENST00000531326 CCAR2Q8N163 923 aaKnown RBP18.31■□□□□ 0.52
PTPN11-204ENST00000531326 FRS2Q8WU20 508 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 FAM172AQ8WUF8 416 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 PDLIM2Q96JY6 352 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 CNPY3Q9BT09 278 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 ARHGEF38Q9NXL2 777 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 INTUQ9ULD6 942 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 REXO2Q9Y3B8 237 aaKnown RBP18.31■□□□□ 0.52
PTPN11-204ENST00000531326 PCDHA13Q9Y5I0 950 aa18.31■□□□□ 0.52
PTPN11-204ENST00000531326 PLK4O00444 970 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms