RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 HPS4Q9NQG7 708 aa12.24□□□□□ -0.45
UBASH3B-207ENST00000530917 RAB6BQ9NRW1 208 aa12.24□□□□□ -0.45
UBASH3B-207ENST00000530917 ZDHHC18Q9NUE0 388 aa12.24□□□□□ -0.45
UBASH3B-207ENST00000530917 UBA2Q9UBT2 640 aaPredicted RBP12.24□□□□□ -0.45
UBASH3B-207ENST00000530917 VPS28Q9UK41 221 aa12.24□□□□□ -0.45
UBASH3B-207ENST00000530917 NFU1Q9UMS0 254 aa12.24□□□□□ -0.45
UBASH3B-207ENST00000530917 ATP8A1Q9Y2Q0 1164 aa12.24□□□□□ -0.45
UBASH3B-207ENST00000530917 FARP1Q9Y4F1 1045 aaPredicted RBP12.24□□□□□ -0.45
UBASH3B-207ENST00000530917 CCDC151A5D8V7 595 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 CBX4O00257 560 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 CISD3P0C7P0 127 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 MYBL2P10244 700 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 H2AFXP16104 143 aaPredicted RBP12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 GLDCP23378 1020 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 ECHS1P30084 290 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 MMP13P45452 471 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 GEMIN4P57678 1058 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 ARF5P84085 180 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 SLC20A2Q08357 652 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 SEMA5AQ13591 1074 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 GRM2Q14416 872 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 LBRQ14739 615 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 GAB4Q2WGN9 574 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 LEXMQ3ZCV2 418 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 INO80DQ53TQ3 878 aaPredicted RBP12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 PITRM1Q5JRX3 1037 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 FAM182AQ5T1J6 154 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 RETSATQ6NUM9 610 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 ETFBKMTQ8IXQ9 262 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 BBS5Q8N3I7 341 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 CPA6Q8N4T0 437 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 NAT16Q8N8M0 369 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 NAT8LQ8N9F0 302 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 FBXO25Q8TCJ0 367 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 USP33Q8TEY7 942 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 HNRNPLLQ8WVV9 542 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 CPT1BQ92523 772 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 NXPE3Q969Y0 559 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 EXOC4Q96A65 974 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 PPP1R2P1Q96PQ5 205 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 PHF7Q9BWX1 381 aaPredicted RBP12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 FOXP3Q9BZS1 431 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 GBA3Q9H227 469 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 GLOD4Q9HC38 313 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 ABCB8Q9NUT2 735 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 HAUS2Q9NVX0 235 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 RSPH14Q9UHP6 348 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 VPS51Q9UID3 782 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 GGA2Q9UJY4 613 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 INTS6Q9UL03 887 aaKnown RBP12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 SHOC2Q9UQ13 582 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 SLC27A6Q9Y2P4 619 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 NUMBLQ9Y6R0 609 aa12.23□□□□□ -0.45
UBASH3B-207ENST00000530917 OTOL1A6NHN0 477 aaPredicted RBP12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 C2CD4DB7Z1M9 353 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 PSMD3O43242 534 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 SNAP91O60641 907 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 ERLIN1O75477 346 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 NEBLO76041 1014 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 CD160O95971 181 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 HLA-DQB2P05538 268 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 PABPC1P11940 636 aaKnown RBP12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 TPSB2P20231 275 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 PSMB4P28070 264 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 GDI1P31150 447 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 BASP1P80723 227 aaKnown RBP12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 CDK16Q00536 496 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 SULT2A1Q06520 285 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 PRPSAP1Q14558 356 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 KCNJ11Q14654 390 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 CYTH1Q15438 398 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 TPSAB1Q15661 275 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 SMAD2Q15796 467 aaKnown RBP12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 PUS10Q3MIT2 529 aaKnown RBP12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 MAP9Q49MG5 647 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 METTL3Q86U44 580 aaKnown RBP12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 KLHDC8BQ8IXV7 354 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 ZNF419Q96HQ0 510 aaPredicted RBP12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 FCRL5Q96RD9 977 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 TSPYL1Q9H0U9 437 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 SLC25A51Q9H1U9 297 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 NEUROG2Q9H2A3 272 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 NT5MQ9NPB1 228 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 DNAJC17Q9NVM6 304 aaKnown RBP12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 ARGLU1Q9NWB6 273 aaPredicted RBP12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 MTRF1LQ9UGC7 380 aaKnown RBP12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 SEPT3Q9UH03 358 aa12.22□□□□□ -0.45
UBASH3B-207ENST00000530917 TCRBV7S3A2A0A539 114 aa12.21□□□□□ -0.45
UBASH3B-207ENST00000530917 ERI2A8K979 691 aaKnown RBP12.21□□□□□ -0.45
UBASH3B-207ENST00000530917 ARNTLO00327 626 aa12.21□□□□□ -0.45
UBASH3B-207ENST00000530917 TULP3O75386 442 aa12.21□□□□□ -0.45
UBASH3B-207ENST00000530917 NFKB1P19838 968 aa12.21□□□□□ -0.45
UBASH3B-207ENST00000530917 CES1P23141 567 aa12.21□□□□□ -0.45
UBASH3B-207ENST00000530917 HSPA9P38646 679 aaKnown RBP12.21□□□□□ -0.45
UBASH3B-207ENST00000530917 DGKGP49619 791 aa12.21□□□□□ -0.45
UBASH3B-207ENST00000530917 CBLBQ13191 982 aa12.21□□□□□ -0.45
UBASH3B-207ENST00000530917 ZNF235Q14590 738 aa12.21□□□□□ -0.45
UBASH3B-207ENST00000530917 ITPRIPL2Q3MIP1 535 aa12.21□□□□□ -0.45
UBASH3B-207ENST00000530917 FUT11Q495W5 492 aa12.21□□□□□ -0.45
UBASH3B-207ENST00000530917 FAXCQ5TGI0 409 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms