RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 GSTO1P78417 241 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 MECOMQ03112 1051 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 TFCP2Q12800 502 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 SEMA3BQ13214 749 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 MTX1Q13505 466 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 RABEP1Q15276 862 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 GORABQ5T7V8 394 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 TLDC1Q6P9B6 456 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 CLASRPQ8N2M8 674 aaKnown RBP7.79□□□□□ -1.16
CSDE1-213ENST00000530784 ARHGAP45Q92619 1136 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 NEUROD6Q96NK8 337 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 HTATIP2Q9BUP3 242 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 AGTPBP1Q9UPW5 1226 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 AFG3L2Q9Y4W6 797 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 CEP83Q9Y592 693 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 PCDHGB2Q9Y5G2 931 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 COL2A1P02458 1487 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-213ENST00000530784 BRCA2P51587 3418 aa7.79□□□□□ -1.16
CSDE1-213ENST00000530784 PODXLO00592 558 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 PPEF2O14830 753 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 LDHCP07864 332 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 SRGAP2BP0DMP2 458 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 TACR3P29371 465 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 RHBDL3P58872 404 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 NSUN2Q08J23 767 aaKnown RBP eCLIP7.78□□□□□ -1.16
CSDE1-213ENST00000530784 FBXO38Q6PIJ6 1188 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 PIK3AP1Q6ZUJ8 805 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 SPATA5Q8NB90 893 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 U2AF1L4Q8WU68 220 aaKnown RBP7.78□□□□□ -1.16
CSDE1-213ENST00000530784 KIAA1191Q96A73 305 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 SIGLEC11Q96RL6 698 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 CERS4Q9HA82 394 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 TRNAU1APQ9NX07 287 aaKnown RBP7.78□□□□□ -1.16
CSDE1-213ENST00000530784 ELOVL5Q9NYP7 299 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 RAI14Q9P0K7 980 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 HMG20BQ9P0W2 317 aa7.78□□□□□ -1.16
CSDE1-213ENST00000530784 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-213ENST00000530784 HEMK1Q9Y5R4 338 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-213ENST00000530784 DOCK1Q14185 1865 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 RRHO14718 337 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 IPO8O15397 1037 aaKnown RBP7.77□□□□□ -1.17
CSDE1-213ENST00000530784 GSTM5P46439 218 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 HSPA7P48741 367 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 CFHR1Q03591 330 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 ZNF91Q05481 1191 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 GAB1Q13480 694 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 MPEG1Q2M385 716 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 CCDC144NLQ6NUI1 221 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 UBE2Q1Q7Z7E8 422 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 ANKRD13CQ8N6S4 541 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 CUL5Q93034 780 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 NSUN4Q96CB9 384 aaKnown RBP7.77□□□□□ -1.17
CSDE1-213ENST00000530784 TM2D2Q9BX73 214 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 OSBPL5Q9H0X9 879 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-213ENST00000530784 RXFP3Q9NSD7 469 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 ARL8BQ9NVJ2 186 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 PI4KBQ9UBF8 816 aa7.77□□□□□ -1.17
CSDE1-213ENST00000530784 CCDC187A0A096LP49 1063 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 SGPL1O95470 568 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 UQCRFS1P1P0C7P4 283 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 ALADP13716 330 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 DUSP1P28562 367 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 PTGER1P34995 402 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 SPP2Q13103 211 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 G3BP1Q13283 466 aaKnown RBP eCLIP7.76□□□□□ -1.173e-15■□□□□ 8.9
CSDE1-213ENST00000530784 CNGA3Q16281 694 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 FAM110CQ1W6H9 321 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 P3H1Q32P28 736 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 PXDC1Q5TGL8 231 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 ANO7Q6IWH7 933 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 TFAP2DQ7Z6R9 452 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 TEX11Q8IYF3 940 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 NANOGP1Q8N7R0 232 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 OVCA2Q8WZ82 227 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 FRAT1Q92837 279 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-213ENST00000530784 COQ8BQ96D53 544 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 TNIP3Q96KP6 325 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 ZNF48Q96MX3 618 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-213ENST00000530784 DEFB118Q96PH6 123 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 NUDT22Q9BRQ3 303 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 AGO4Q9HCK5 861 aaKnown RBP7.76□□□□□ -1.17
CSDE1-213ENST00000530784 MLXIPLQ9NP71 852 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 TMEM184CQ9NVA4 438 aa7.76□□□□□ -1.17
CSDE1-213ENST00000530784 MAST2Q6P0Q8 1798 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 PNMA6EA0A0J9YXQ4 647 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 M0QZQ0 153 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 DHHO43323 396 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 BAG3O95817 575 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 TFRCP02786 760 aaKnown RBP7.75□□□□□ -1.17
CSDE1-213ENST00000530784 CAPN2P17655 700 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 MMP8P22894 467 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 THBS4P35443 961 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 VPS41P49754 854 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 HMGCS2P54868 508 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 ELF2Q15723 593 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 MAP9Q49MG5 647 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 TTC39AQ5SRH9 613 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 ATF7IPQ6VMQ6 1270 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 SRLQ86TD4 932 aa7.75□□□□□ -1.17
CSDE1-213ENST00000530784 GLCCI1Q86VQ1 547 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms