RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 GLDCP23378 1020 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 CD38P28907 300 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 PBX1P40424 430 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 TAS2R38P59533 333 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 CNTN1Q12860 1018 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 OVGP1Q12889 678 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 MAMLD1Q13495 774 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 SUZ12Q15022 739 aaKnown RBP12.31□□□□□ -0.44
COPB1-206ENST00000529210 FAM72AQ5TYM5 149 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 FAM72DQ6L9T8 149 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 PHLDB2Q86SQ0 1253 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 FAM72BQ86X60 149 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 IQCDQ96DY2 449 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 SLC6A18Q96N87 628 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 MCEEQ96PE7 176 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 EIF3CQ99613 913 aaKnown RBP12.31□□□□□ -0.44
COPB1-206ENST00000529210 SEPT11Q9NVA2 429 aaKnown RBP12.31□□□□□ -0.44
COPB1-206ENST00000529210 PARVAQ9NVD7 372 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 TAS2R14Q9NYV8 317 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 FZD10Q9ULW2 581 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 SNX11Q9Y5W9 270 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 WASF2Q9Y6W5 498 aa12.31□□□□□ -0.44
COPB1-206ENST00000529210 COL5A1P20908 1838 aaPredicted RBP12.31□□□□□ -0.44
COPB1-206ENST00000529210 MAP1BP46821 2468 aaKnown RBP12.31□□□□□ -0.44
COPB1-206ENST00000529210 SPEGQ15772 3267 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 TBC1D3DA0A087WVF3 549 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 TBC1D3IA0A087WXS9 549 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 TBC1D3EA0A087X179 549 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 TBC1D3KA0A087X1G2 549 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 A0A1B0GTQ1 180 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 A0A1W2PQJ5 194 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 TBC1D3FA6NER0 549 aaPredicted RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 ZSCAN5CA6NGD5 496 aaPredicted RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 FAM47DPA6NHR8 397 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 TBC1D3LB9A6J9 549 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 CBX4O00257 560 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 YKT6O15498 198 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 RAMP2O60895 175 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 WNT1P04628 370 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 TBC1D3HP0C7X1 549 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 DESP17661 470 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 NUMBP49757 651 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 CCT8P50990 548 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 YBEYP58557 167 aaPredicted RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 PPP2CBP62714 309 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 PPP2CAP67775 309 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 FAM193AP78312 1265 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 SIM1P81133 766 aaPredicted RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 TRIP6Q15654 476 aaKnown RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 CARD16Q5EG05 197 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 EFHC2Q5JST6 749 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 KCNT1Q5JUK3 1230 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 SFMBT2Q5VUG0 894 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 E4F1Q66K89 784 aaPredicted RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 TBC1D3GQ6DHY5 549 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 TBC1D3CQ6IPX1 549 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 NAPEPLDQ6IQ20 393 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 LINGO4Q6UY18 593 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 DPY19L3Q6ZPD9 716 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 ZNF571Q7Z3V5 609 aaPredicted RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 RAB44Q7Z6P3 723 aaPredicted RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 PRPF39Q86UA1 669 aaKnown RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 ZSCAN30Q86W11 494 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 DRC7Q8IY82 874 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 TBC1D3Q8IZP1 549 aaPredicted RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 RTL3Q8N8U3 475 aaKnown RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 MFSD2AQ8NA29 543 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 CASKIN2Q8WXE0 1202 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 SYN2Q92777 582 aaPredicted RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 VOPP1Q96AW1 172 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 PPP1R16AQ96I34 528 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 LRIG1Q96JA1 1093 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 TMEM121BQ9BXQ6 578 aaPredicted RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 HAUS4Q9H6D7 363 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 NOL6Q9H6R4 1146 aaKnown RBP12.3□□□□□ -0.44
COPB1-206ENST00000529210 ERVMER34-1Q9H9K5 563 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 CBX8Q9HC52 389 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 DONSONQ9NYP3 566 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 IL36AQ9UHA7 158 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 NEUROG3Q9Y4Z2 214 aa12.3□□□□□ -0.44
COPB1-206ENST00000529210 FRYQ5TBA9 3013 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 USP24Q9UPU5 2620 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 WDFY3Q8IZQ1 3526 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 SPAARA0A1B0GVQ0 90 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 SYCE3A1L190 88 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 TMEM191CA6NGB0 347 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 H0Y8X5 98 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 DDX3XO00571 662 aaKnown RBP eCLIP12.29□□□□□ -0.445e-24■■■■□ 22.8
COPB1-206ENST00000529210 FGF10O15520 208 aaPredicted RBP12.29□□□□□ -0.44
COPB1-206ENST00000529210 KDELR3O43731 214 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 AP1G1O43747 822 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 RTN2O75298 545 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 GSRP00390 522 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 ITGB7P26010 798 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 ACVRL1P37023 503 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 RECQLP46063 649 aaPredicted RBP12.29□□□□□ -0.44
COPB1-206ENST00000529210 RXRGP48443 463 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 C21orf59P57076 290 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 OGDHQ02218 1023 aa12.29□□□□□ -0.44
COPB1-206ENST00000529210 POLD3Q15054 466 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms