RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 TMEM39AQ9NV64 488 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 PCMTD2Q9NV79 361 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 TRPM5Q9NZQ8 1165 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 MID2Q9UJV3 735 aa15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 NYNRINQ9P2P1 1898 aaKnown RBP15.01□□□□□ -0.01
ECHDC1-220ENST00000528402 WDR91A4D1P6 747 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 TBX18O95935 607 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 PEX11BO96011 259 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 BPGMP07738 259 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 ATF6P18850 670 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 ALDH1A3P47895 512 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 CREMQ03060 361 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 BNIP1Q12981 228 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 SERINC3Q13530 473 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 VEPH1Q14D04 833 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 SLC14A2Q15849 920 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 RABGAP1LQ5R372 815 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 RAP1GAP2Q684P5 730 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15□□□□□ -0.01
ECHDC1-220ENST00000528402 TMEM173Q86WV6 379 aaPredicted RBP15□□□□□ -0.01
ECHDC1-220ENST00000528402 CMTR2Q8IYT2 770 aaKnown RBP15□□□□□ -0.01
ECHDC1-220ENST00000528402 TMEM169Q96HH4 297 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 ZNF512Q96ME7 567 aaPredicted RBP15□□□□□ -0.01
ECHDC1-220ENST00000528402 LRRC37BQ96QE4 947 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 FICDQ9BVA6 458 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 SLCO1B3Q9NPD5 702 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 CHRAC1Q9NRG0 131 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 NDFIP2Q9NV92 336 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 UXTQ9UBK9 157 aaPredicted RBP15□□□□□ -0.01
ECHDC1-220ENST00000528402 ZNF212Q9UDV6 495 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 ANKRD6Q9Y2G4 727 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 ZNF840PA6NDX5 716 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 HNRNPCL1O60812 293 aaKnown RBP15□□□□□ -0.01
ECHDC1-220ENST00000528402 SIN3BO75182 1162 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 SOAT2O75908 522 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 UPP2O95045 317 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 PAPSS2O95340 614 aaPredicted RBP15□□□□□ -0.01
ECHDC1-220ENST00000528402 ALDOAP04075 364 aaKnown RBP15□□□□□ -0.01
ECHDC1-220ENST00000528402 APOA4P06727 396 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 CLTBP09497 229 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 OR1E1P30953 314 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 MNX1P50219 401 aaPredicted RBP15□□□□□ -0.01
ECHDC1-220ENST00000528402 CDH4P55283 916 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 TAF12Q16514 161 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 ALFQ53S48 1182 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 SPOUT1Q5T280 376 aaKnown RBP15□□□□□ -0.01
ECHDC1-220ENST00000528402 DENND5AQ6IQ26 1287 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 CDHR3Q6ZTQ4 885 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 CNTN4Q8IWV2 1026 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 LMNTD2Q8IXW0 634 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 SLC39A11Q8N1S5 342 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 ARMC2Q8NEN0 867 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 IPMKQ8NFU5 416 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 SPATA22Q8NHS9 363 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 CALML6Q8TD86 181 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 C10orf82Q8WW14 230 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 SREK1Q8WXA9 508 aaKnown RBP15□□□□□ -0.01
ECHDC1-220ENST00000528402 SPOCK2Q92563 424 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 IGSF8Q969P0 613 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 MFSD3Q96ES6 412 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 HMCESQ96FZ2 354 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 CLSTN3Q9BQT9 956 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 NACA2Q9H009 215 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 FAM96AQ9H5X1 160 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 CCSER2Q9H7U1 834 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15□□□□□ -0.01
ECHDC1-220ENST00000528402 TXLNGQ9NUQ3 528 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 ABCF3Q9NUQ8 709 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 PIH1D1Q9NWS0 290 aaKnown RBP15□□□□□ -0.01
ECHDC1-220ENST00000528402 UBP1Q9NZI7 540 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 MAGED2Q9UNF1 606 aaPredicted RBP15□□□□□ -0.01
ECHDC1-220ENST00000528402 SSX2IPQ9Y2D8 614 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 TCAF1Q9Y4C2 921 aa15□□□□□ -0.01
ECHDC1-220ENST00000528402 HEATR9A2RTY3 570 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 TPP1O14773 563 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 LATS1O95835 1130 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 MT-CYBP00156 380 aaPredicted RBP14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 EPOP01588 193 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 COL6A2P12110 1019 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 TPH1P17752 444 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 CES1P23141 567 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 RASSF2P50749 326 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 WNT3AP56704 352 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 RAB33AQ14088 237 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 PDE1CQ14123 709 aaPredicted RBP14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 HSP90AA5PQ58FG0 334 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 KIAA0930Q6ICG6 404 aaPredicted RBP14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 KDELC1Q6UW63 502 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 CES3Q6UWW8 571 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 KIAA0408Q6ZU52 694 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 DDX53Q86TM3 631 aaKnown RBP14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 UNC5BQ8IZJ1 945 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 FITM2Q8N6M3 262 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 PEX13Q92968 403 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 MRGPRX2Q96LB1 330 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 FAM167BQ9BTA0 163 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 MCMBPQ9BTE3 642 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 RHOJQ9H4E5 214 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 ATP13A1Q9HD20 1204 aa14.99□□□□□ -0.01
ECHDC1-220ENST00000528402 THAP1Q9NVV9 213 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms