RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 BRSK2Q8IWQ3 736 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 STAMQ92783 540 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 FRMD8Q9BZ67 464 aaPredicted RBP6.3□□□□□ -1.4
PCF11-202ENST00000528336 NOD2Q9HC29 1040 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 EFCAB5A4FU69 1503 aa6.3□□□□□ -1.4
PCF11-202ENST00000528336 A6NNC1 897 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 FOXO6A8MYZ6 492 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 SOCS2O14508 198 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 TLX3O43711 291 aaPredicted RBP6.29□□□□□ -1.4
PCF11-202ENST00000528336 CCNT1O60563 726 aaKnown RBP6.29□□□□□ -1.4
PCF11-202ENST00000528336 CHRNB1P11230 501 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 HSD3B1P14060 373 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 PTPRGP23470 1445 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 PDE1CQ14123 709 aaPredicted RBP6.29□□□□□ -1.4
PCF11-202ENST00000528336 TAF12Q16514 161 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 SAMD9Q5K651 1589 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 ENTPD8Q5MY95 495 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 TTC39AQ5SRH9 613 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 MANEAQ5SRI9 462 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 FAM171A1Q5VUB5 890 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 C1orf122Q6ZSJ8 110 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 ARFGAP1Q8N6T3 406 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 GCC1Q96CN9 775 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 MSI2Q96DH6 328 aaKnown RBP6.29□□□□□ -1.4
PCF11-202ENST00000528336 PPP1R10Q96QC0 940 aaKnown RBP6.29□□□□□ -1.4
PCF11-202ENST00000528336 Q9N2J8 555 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 SPAG4Q9NPE6 437 aa6.29□□□□□ -1.4
PCF11-202ENST00000528336 A0A0G2JK05 382 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 A0A1B0GVC2 190 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 NDUFB8O95169 186 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 HLA-DQA2P01906 255 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 HSP90AB1P08238 724 aaKnown RBP6.28□□□□□ -1.4
PCF11-202ENST00000528336 TMEM191BP0C7N4 346 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 FCGR2AP12318 317 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 PTGER1P34995 402 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 NR4A2P43354 598 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 MVDP53602 400 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 ARHGAP8P85298 464 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 SEMA3AQ14563 771 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 INPP5JQ15735 1006 aaPredicted RBP6.28□□□□□ -1.4
PCF11-202ENST00000528336 AP5B1Q2VPB7 878 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 ALG10Q5BKT4 473 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 ALG10BQ5I7T1 473 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 CBWD5Q5RIA9 395 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 MAATS1Q7Z4T9 603 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 GALNT7Q86SF2 657 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 CENPIQ92674 756 aaPredicted RBP6.28□□□□□ -1.4
PCF11-202ENST00000528336 CLMNQ96JQ2 1002 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 PPM1MQ96MI6 270 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 WDR83Q9BRX9 315 aaKnown RBP6.28□□□□□ -1.4
PCF11-202ENST00000528336 CADM1Q9BY67 442 aaKnown RBP6.28□□□□□ -1.4
PCF11-202ENST00000528336 CTDSP1Q9GZU7 261 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.28□□□□□ -1.4
PCF11-202ENST00000528336 POT1Q9NUX5 634 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 ACAD8Q9UKU7 415 aa6.28□□□□□ -1.4
PCF11-202ENST00000528336 LY6G6EA0A0G2JKS1 128 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 TMEM272A0A1B0GTI8 110 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 A6NCN8 305 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 J3KRW8 73 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 AGR2O95994 175 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 LCKP06239 509 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 FAM200BP0CF97 657 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 CKMT1AP12532 417 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 TNNT1P13805 278 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 NUCB1Q02818 461 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 GOLGA8FQ08AF8 430 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 BYSLQ13895 437 aaKnown RBP6.27□□□□□ -1.41
PCF11-202ENST00000528336 ANKRD1Q15327 319 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 PLK5Q496M5 336 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 C5orf22Q49AR2 442 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 NUGGCQ68CJ6 796 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 IGFN1Q86VF2 1251 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 MMP21Q8N119 569 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 CMASQ8NFW8 434 aaPredicted RBP6.27□□□□□ -1.41
PCF11-202ENST00000528336 HMCESQ96FZ2 354 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 MASTLQ96GX5 879 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 HIPK3Q9H422 1215 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 SEMA4BQ9NPR2 832 aaPredicted RBP6.27□□□□□ -1.41
PCF11-202ENST00000528336 DECR2Q9NUI1 292 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 GJD2Q9UKL4 321 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 PCDHA12Q9UN75 941 aa6.27□□□□□ -1.41
PCF11-202ENST00000528336 PEX12O00623 359 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 KLK10O43240 276 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 ATG13O75143 517 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 ZC3H11AO75152 810 aaKnown RBP eCLIP6.26□□□□□ -1.41
PCF11-202ENST00000528336 METTL18O95568 372 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 LMO1P25800 156 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 MAPK9P45984 424 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 TAF11Q15544 211 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 CCDC92Q53HC0 331 aaPredicted RBP6.26□□□□□ -1.41
PCF11-202ENST00000528336 SH2D4BQ5SQS7 431 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 CASC1Q6TDU7 716 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 COLCA1Q6ZS62 124 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 RSRC2Q7L4I2 434 aaKnown RBP6.26□□□□□ -1.41
PCF11-202ENST00000528336 IRF2BP2Q7Z5L9 587 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 OR8H2Q8N162 312 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 NAXEQ8NCW5 288 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 MPLKIPQ8TAP9 179 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 TMEM174Q8WUU8 243 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 RSPH1Q8WYR4 309 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms