RNA–Protein interactions for RNA: ENST00000528039.5

RBM4-210, Transcript of RNA binding motif protein 4, human

TSL 3

Gene RBM4, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-210	ENST00000528039		K7ENP7	123 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	RAD51B	O15315	384 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	GRAP2	O75791	330 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	CNTN5	O94779	1100 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	PCDH8	O95206	1070 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	CSF2	P04141	144 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	KRT5	P13647	590 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	RRM1	P23921	792 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	CCR1	P32246	355 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	DUSP3	P51452	185 aa	Predicted RBP	11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	DRAP1	Q14919	205 aa	Predicted RBP	11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	ZSCAN23	Q3MJ62	389 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	TPRG1L	Q5T0D9	272 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	INO80C	Q6PI98	192 aa	Predicted RBP	11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	IGF2-AS	Q6U949	168 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	CRTC1	Q6UUV9	634 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	GAS2L3	Q86XJ1	694 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	DEFB106A	Q8N104	65 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	ATP11C	Q8NB49	1132 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	EHBP1	Q8NDI1	1231 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	TMIE	Q8NEW7	156 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	GRIN3A	Q8TCU5	1115 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	RNF34	Q969K3	372 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	IFT43	Q96FT9	208 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	MED8	Q96G25	268 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	SLC2A13	Q96QE2	648 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	MED15	Q96RN5	788 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	MUC3B	Q9H195	1237 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	TNKS2	Q9H2K2	1166 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	USP29	Q9HBJ7	922 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	GDPD2	Q9HCC8	539 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	ANLN	Q9NQW6	1124 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	RMND1	Q9NWS8	449 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	VPS51	Q9UID3	782 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	ENTPD2	Q9Y5L3	495 aa		11.21	□□□□□ -0.61
RBM4-210	ENST00000528039	SPTY2D1-AS1	A0A0U1RR47	76 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	CPED1	A4D0V7	1026 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039		A6NNZ2	444 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039		I6L893	689 aa	Predicted RBP	11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	ARHGAP6	O43182	974 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	SLC28A2	O43868	658 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	PAGE1	O75459	146 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	CLDN11	O75508	207 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	WISP1	O95388	367 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	PAK4	O96013	591 aa	Predicted RBP	11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	SLC2A3	P11169	496 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	NME1	P15531	152 aa	Known RBP	11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	CD44	P16070	742 aa	Known RBP	11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	RBMS1	P29558	406 aa	Known RBP	11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	KCNC4	Q03721	635 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	NME3	Q13232	169 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	PDCL	Q13371	301 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	DEFB133	Q30KQ1	61 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	C5orf22	Q49AR2	442 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	ALF	Q53S48	1182 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	ARSI	Q5FYB1	569 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	PERM1	Q5SV97	790 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	FOXR1	Q6PIV2	292 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	LINGO4	Q6UY18	593 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	ERN2	Q76MJ5	926 aa	Known RBP	11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	WDTC1	Q8N5D0	677 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	SPATA20	Q8TB22	786 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	ZNF606	Q8WXB4	792 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	PDLIM2	Q96JY6	352 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	GSDMA	Q96QA5	445 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	CPXM1	Q96SM3	734 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	DUSP23	Q9BVJ7	150 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	HDAC8	Q9BY41	377 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	SLC17A9	Q9BYT1	436 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	DACH1	Q9UI36	760 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	HS3ST3A1	Q9Y663	406 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039	PTPN13	Q12923	2485 aa		11.2	□□□□□ -0.62
RBM4-210	ENST00000528039		A0A0D9SEW6	157 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	EME2	A4GXA9	379 aa	Predicted RBP	11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	CDRT15L2	A8MXV6	281 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	P4HA2	O15460	535 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	SPINT1	O43278	529 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	EFS	O43281	561 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	THAP12	O43422	761 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	ZNF821	O75541	412 aa	Predicted RBP	11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	LEFTY1	O75610	366 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	ENDOD1	O94919	500 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	PRNP	P04156	253 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	GNA15	P30679	374 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	PDX1	P52945	283 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	CDH4	P55283	916 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	CDK17	Q00537	523 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	CLN3	Q13286	438 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	MEA1	Q16626	185 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	CCDC40	Q4G0X9	1142 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	OTUD1	Q5VV17	481 aa	Predicted RBP	11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	ISM2	Q6H9L7	571 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	KYAT3	Q6YP21	454 aa	Known RBP	11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	CCDC81	Q6ZN84	652 aa		11.19	□□□□□ -0.62
RBM4-210	ENST00000528039	DPY19L3	Q6ZPD9	716 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 259.6 ms