RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 POLD3Q15054 466 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-213ENST00000527897 KIF19Q2TAC6 998 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 ARSIQ5FYB1 569 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 FIGNQ5HY92 759 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 IL27RAQ6UWB1 636 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 DPY19L3Q6ZPD9 716 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 SETD7Q8WTS6 366 aaKnown RBP15.86■□□□□ 0.13
CAPN1-213ENST00000527897 ARHGEF2Q92974 986 aaKnown RBP15.86■□□□□ 0.13
CAPN1-213ENST00000527897 SERAC1Q96JX3 654 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 TM6SF2Q9BZW4 377 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 EBF2Q9HAK2 575 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 IL36AQ9UHA7 158 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 NEU3Q9UQ49 428 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 FNDC3AQ9Y2H6 1198 aaKnown RBP15.86■□□□□ 0.13
CAPN1-213ENST00000527897 KNL1Q8NG31 2342 aa15.86■□□□□ 0.13
CAPN1-213ENST00000527897 TP53BP1Q12888 1972 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-213ENST00000527897 ZMPSTE24O75844 475 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 PRNPP04156 253 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 GZMAP12544 262 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 L1CAMP32004 1257 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 GRIA4P48058 902 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 CCR5P51681 352 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 SIM1P81133 766 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-213ENST00000527897 SLC20A2Q08357 652 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 NFKBIBQ15653 356 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 AGBL4Q5VU57 503 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 PLEKHA7Q6IQ23 1121 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 PIP4P1Q86T03 277 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 OR6K2Q8NGY2 324 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 ARRDC3Q96B67 414 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 ORAI3Q9BRQ5 295 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 ACE2Q9BYF1 805 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-213ENST00000527897 TRIM7Q9C029 511 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 MAGEH1Q9H213 219 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 ZDHHC6Q9H6R6 413 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 TM7SF3Q9NS93 570 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 AP4E1Q9UPM8 1137 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 PCDHB9Q9Y5E1 797 aa15.85■□□□□ 0.13
CAPN1-213ENST00000527897 DOCK9Q9BZ29 2069 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 A0A1W2PQJ5 194 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 PCNX2A6NKB5 2137 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 RNF103O00237 685 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 SLC7A4O43246 635 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 PLRG1O43660 514 aaKnown RBP15.84■□□□□ 0.13
CAPN1-213ENST00000527897 LEFTY1O75610 366 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 GJB3O75712 270 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 RNF8O76064 485 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 PBX1P40424 430 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 CCNHP51946 323 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-213ENST00000527897 TPI1P60174 286 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 RACK1P63244 317 aaKnown RBP15.84■□□□□ 0.13
CAPN1-213ENST00000527897 IL9RQ01113 521 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 SLC14A1Q13336 389 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 CARD16Q5EG05 197 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 KCNT1Q5JUK3 1230 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 PRPF39Q86UA1 669 aaKnown RBP15.84■□□□□ 0.13
CAPN1-213ENST00000527897 VPS36Q86VN1 386 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 NAXDQ8IW45 347 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 PCDH20Q8N6Y1 951 aaKnown RBP15.84■□□□□ 0.13
CAPN1-213ENST00000527897 TMIEQ8NEW7 156 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 KLK6Q92876 244 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 TRIM11Q96F44 468 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 CEP44Q9C0F1 390 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 DHX35Q9H5Z1 703 aaKnown RBP15.84■□□□□ 0.13
CAPN1-213ENST00000527897 CATSPERBQ9H7T0 1116 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 OSGEPQ9NPF4 335 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 ANGPTL2Q9UKU9 493 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 LUC7L2Q9Y383 392 aaKnown RBP15.84■□□□□ 0.13
CAPN1-213ENST00000527897 SCINQ9Y6U3 715 aa15.84■□□□□ 0.13
CAPN1-213ENST00000527897 TMEM191CA6NGB0 347 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 UPK3BL1B0FP48 263 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 UPK3BL2E5RIL1 263 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 WNT9AO14904 365 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 DAPK3O43293 454 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 BUB1O43683 1085 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 ZNF821O75541 412 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-213ENST00000527897 SERPING1P05155 500 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 TPM3P06753 285 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 CD38P28907 300 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 PMLP29590 882 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 GKP32189 559 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 AIF1P55008 147 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 GEMIN4P57678 1058 aaKnown RBP15.83■□□□□ 0.12
CAPN1-213ENST00000527897 FAM193AP78312 1265 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 ZBED6P86452 979 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 CCDC15Q0P6D6 951 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 PRAMEF14Q5SWL7 426 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 PIP5KL1Q5T9C9 394 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 RTL3Q8N8U3 475 aaKnown RBP15.83■□□□□ 0.12
CAPN1-213ENST00000527897 NETO2Q8NC67 525 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 SKA1Q96BD8 255 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 PPP1R16AQ96I34 528 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 CNTNAP3BQ96NU0 1288 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 MYOCQ99972 504 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 HEPHQ9BQS7 1158 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 CNTNAP3Q9BZ76 1288 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 XPO4Q9C0E2 1151 aaKnown RBP15.83■□□□□ 0.12
CAPN1-213ENST00000527897 KDM4CQ9H3R0 1056 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 RETREG1Q9H6L5 497 aa15.83■□□□□ 0.12
CAPN1-213ENST00000527897 HECAQ9UBI9 543 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms