RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 HDAC8Q9BY41 377 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 WDCPQ9H6R7 721 aa24.11■■□□□ 1.45
CPSF1-202ENST00000527827 CFAP46Q8IYW2 2715 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 OPA1O60313 960 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 PCDH8O95206 1070 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 MYF5P13349 255 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 PON1P27169 355 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 CLCN1P35523 988 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 CLCN6P51797 869 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 EXOC3L4Q17RC7 722 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 TMEM259Q4ZIN3 620 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 C22orf39Q6P5X5 142 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 GRIN3AQ8TCU5 1115 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 NT5C3BQ969T7 300 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 APOLD1Q96LR9 279 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 TNKS2Q9H2K2 1166 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 SIX2Q9NPC8 291 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 PLCB1Q9NQ66 1216 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 DYRK4Q9NR20 520 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 TMPRSS4Q9NRS4 437 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 RRN3Q9NYV6 651 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 MPP6Q9NZW5 540 aa24.1■■□□□ 1.45
CPSF1-202ENST00000527827 LY6G6EA0A0G2JKS1 128 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 TEX51A0A1B0GUA7 166 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 GTPBP10A4D1E9 387 aaKnown RBP24.09■■□□□ 1.45
CPSF1-202ENST00000527827 ZNF821O75541 412 aaPredicted RBP24.09■■□□□ 1.45
CPSF1-202ENST00000527827 KRT9P35527 623 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 SNX16P57768 344 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 TFAP2DQ7Z6R9 452 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 SLC47A2Q86VL8 602 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 CREBRFQ8IUR6 639 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 PGAP3Q96FM1 320 aaPredicted RBP24.09■■□□□ 1.45
CPSF1-202ENST00000527827 IFT43Q96FT9 208 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 BMFQ96LC9 184 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 SYNCQ9H7C4 482 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 GPR27Q9NS67 375 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.09■■□□□ 1.453e-6■□□□□ 9.1
CPSF1-202ENST00000527827 NLGN3Q9NZ94 848 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 IL36AQ9UHA7 158 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 WASF2Q9Y6W5 498 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 U3KQA8 63 aa24.09■■□□□ 1.45
CPSF1-202ENST00000527827 FOXN3O00409 490 aaPredicted RBP24.08■■□□□ 1.45
CPSF1-202ENST00000527827 GADD45BO75293 160 aaPredicted RBP24.08■■□□□ 1.45
CPSF1-202ENST00000527827 PNMA6AP0CW24 399 aaPredicted RBP24.08■■□□□ 1.45
CPSF1-202ENST00000527827 SULT1E1P49888 294 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 RNASE9P60153 205 aaKnown RBP24.08■■□□□ 1.45
CPSF1-202ENST00000527827 FGL2Q14314 439 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 ZNF542PQ5EBM4 170 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 SMYD5Q6GMV2 418 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 PCSK4Q6UW60 755 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 DPY19L3Q6ZPD9 716 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 Q6ZSR6 202 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 IRF2BP1Q8IU81 584 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 ZDHHC17Q8IUH5 632 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 OR7D4Q8NG98 312 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 C1orf74Q96LT6 269 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 RWDD2AQ9UIY3 292 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 HS3ST3A1Q9Y663 406 aa24.08■■□□□ 1.45
CPSF1-202ENST00000527827 COL27A1Q8IZC6 1860 aaPredicted RBP24.07■■□□□ 1.44
CPSF1-202ENST00000527827 IGLV3-10A0A075B6K4 115 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 A6NNZ2 444 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 LEFTY1O75610 366 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 ENDOD1O94919 500 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 MPOP05164 745 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 ALPPL2P10696 532 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 DEUP1Q05D60 604 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 LRRC31Q6UY01 552 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 FAM181AQ8N9Y4 354 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 HIC2Q96JB3 615 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 ZNF578Q96N58 590 aaPredicted RBP24.07■■□□□ 1.44
CPSF1-202ENST00000527827 TBCBQ99426 244 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 DNAJC28Q9NX36 388 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 ZNF212Q9UDV6 495 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 DNAJC12Q9UKB3 198 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 STAP1Q9ULZ2 295 aa24.07■■□□□ 1.44
CPSF1-202ENST00000527827 POM121BA6NF01 834 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 K7ESM1 405 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 SCAMP1O15126 338 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 ZMPSTE24O75844 475 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 GP1BAP07359 652 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 CXADRP78310 365 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 FZD2Q14332 565 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 PTAR1Q7Z6K3 402 aaPredicted RBP24.06■■□□□ 1.44
CPSF1-202ENST00000527827 DCP2Q8IU60 420 aaKnown RBP24.06■■□□□ 1.44
CPSF1-202ENST00000527827 ZNF843Q8N446 348 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 ZNF248Q8NDW4 579 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 FAM174AQ8TBP5 190 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 PPP1R16AQ96I34 528 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 DEPDC7Q96QD5 511 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 LGMNQ99538 433 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 SLC17A9Q9BYT1 436 aa24.06■■□□□ 1.44
CPSF1-202ENST00000527827 FLNBO75369 2602 aaKnown RBP24.06■■□□□ 1.44
CPSF1-202ENST00000527827 NEMP2A6NFY4 417 aa24.05■■□□□ 1.44
CPSF1-202ENST00000527827 RAD51BO15315 384 aa24.05■■□□□ 1.44
CPSF1-202ENST00000527827 NEBLO76041 1014 aa24.05■■□□□ 1.44
CPSF1-202ENST00000527827 DXOO77932 396 aaKnown RBP24.05■■□□□ 1.44
CPSF1-202ENST00000527827 F9P00740 461 aa24.05■■□□□ 1.44
CPSF1-202ENST00000527827 ADRB3P13945 408 aa24.05■■□□□ 1.44
CPSF1-202ENST00000527827 OR1E1P30953 314 aa24.05■■□□□ 1.44
CPSF1-202ENST00000527827 RECQLP46063 649 aaPredicted RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms