RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 AKT2P31751 481 aa22.87■■□□□ 1.25
TRAPPC4-208ENST00000527680 ATP11AP98196 1134 aa22.87■■□□□ 1.25
TRAPPC4-208ENST00000527680 TARDBPQ13148 414 aaKnown RBP eCLIP22.87■■□□□ 1.25
TRAPPC4-208ENST00000527680 TCP11X2Q5H9J9 407 aa22.87■■□□□ 1.25
TRAPPC4-208ENST00000527680 SFMBT2Q5VUG0 894 aa22.87■■□□□ 1.25
TRAPPC4-208ENST00000527680 C22orf39Q6P5X5 142 aa22.87■■□□□ 1.25
TRAPPC4-208ENST00000527680 PPP1R16AQ96I34 528 aa22.87■■□□□ 1.25
TRAPPC4-208ENST00000527680 DCBLD2Q96PD2 775 aa22.87■■□□□ 1.25
TRAPPC4-208ENST00000527680 NAA15Q9BXJ9 866 aaKnown RBP22.87■■□□□ 1.25
TRAPPC4-208ENST00000527680 CALN1Q9BXU9 219 aa22.87■■□□□ 1.25
TRAPPC4-208ENST00000527680 FZD3Q9NPG1 666 aa22.87■■□□□ 1.25
TRAPPC4-208ENST00000527680 IGLV3-10A0A075B6K4 115 aa22.86■■□□□ 1.25
TRAPPC4-208ENST00000527680 LEFTY1O75610 366 aa22.86■■□□□ 1.25
TRAPPC4-208ENST00000527680 SLC20A2Q08357 652 aa22.86■■□□□ 1.25
TRAPPC4-208ENST00000527680 HES3Q5TGS1 186 aa22.86■■□□□ 1.25
TRAPPC4-208ENST00000527680 ZNF783Q6ZMS7 281 aa22.86■■□□□ 1.25
TRAPPC4-208ENST00000527680 DPY19L3Q6ZPD9 716 aa22.86■■□□□ 1.25
TRAPPC4-208ENST00000527680 PHLDB2Q86SQ0 1253 aa22.86■■□□□ 1.25
TRAPPC4-208ENST00000527680 DRC7Q8IY82 874 aa22.86■■□□□ 1.25
TRAPPC4-208ENST00000527680 TSC1Q92574 1164 aa22.86■■□□□ 1.25
TRAPPC4-208ENST00000527680 TAB2Q9NYJ8 693 aa22.86■■□□□ 1.25
TRAPPC4-208ENST00000527680 TMEM59LQ9UK28 342 aa22.86■■□□□ 1.25
TRAPPC4-208ENST00000527680 ARID1BQ8NFD5 2236 aaPredicted RBP22.86■■□□□ 1.25
TRAPPC4-208ENST00000527680 F8VZ95 297 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 GFPT2O94808 682 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 HNRNPA2B1P22626 353 aaKnown RBP22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 EEF1GP26641 437 aaKnown RBP22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 GNA12Q03113 381 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 MAPK8IP2Q13387 824 aaPredicted RBP22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 CDO1Q16878 200 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 ZNF284Q2VY69 593 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 FBXL19Q6PCT2 694 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 KANSL1Q7Z3B3 1105 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 EMC1Q8N766 993 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 NXPE2Q96DL1 559 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 HDAC8Q9BY41 377 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 VPS16Q9H269 839 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 SCUBE2Q9NQ36 999 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 METTL5Q9NRN9 209 aaKnown RBP22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 DOCK4Q8N1I0 1966 aa22.85■■□□□ 1.25
TRAPPC4-208ENST00000527680 RNF103O00237 685 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 SIGLEC6O43699 453 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 TPM2P07951 284 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 CLDN2P57739 230 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 NOMO3P69849 1222 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 DAB2P98082 770 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 SEMG2Q02383 582 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 ILKQ13418 452 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 ARL13BQ3SXY8 428 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 CARD16Q5EG05 197 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 TRNP1Q6NT89 227 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 RWDD4Q6NW29 188 aaKnown RBP22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 SLC25A45Q8N413 288 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 RYBPQ8N488 228 aaPredicted RBP22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 TMEM145Q8NBT3 493 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 EPS8L1Q8TE68 723 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 FEM1CQ96JP0 617 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 HEPHQ9BQS7 1158 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 KLHL11Q9NVR0 708 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 OR12D3Q9UGF7 316 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 ATRXP46100 2492 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 TRPM6Q9BX84 2022 aa22.84■■□□□ 1.25
TRAPPC4-208ENST00000527680 TRIM38O00635 465 aa22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 DGKAP23743 735 aa22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 SERPINH1P50454 418 aaKnown RBP22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 NEK3P51956 506 aa22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 POLR2FP61218 127 aaKnown RBP22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 ZNF211Q13398 564 aaPredicted RBP22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 CT47A1Q5JQC4 288 aaPredicted RBP22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 SEL1L3Q68CR1 1132 aa22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 ARCQ7LC44 396 aa22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 ZNF677Q86XU0 584 aa22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 PCDH20Q8N6Y1 951 aaKnown RBP22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 OR13H1Q8NG92 308 aa22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 SLC20A1Q8WUM9 679 aa22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 CEP44Q9C0F1 390 aa22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 PPARGC1AQ9UBK2 798 aaKnown RBP22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 ZFR2Q9UPR6 939 aaKnown RBP22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 FCF1Q9Y324 198 aaKnown RBP22.83■■□□□ 1.25
TRAPPC4-208ENST00000527680 MYLKQ15746 1914 aa22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 FFAR2O15552 330 aa22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 SDC4P31431 198 aa22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 C15orf59Q2T9L4 293 aaPredicted RBP22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 Q6ZSR6 202 aa22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 SLC30A5Q8TAD4 765 aa22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 RXFP2Q8WXD0 754 aa22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 SLC17A9Q9BYT1 436 aa22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 ZDHHC6Q9H6R6 413 aa22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 NLRC4Q9NPP4 1024 aa22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 HECAQ9UBI9 543 aaPredicted RBP22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 HPCAL4Q9UM19 191 aa22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 WASF2Q9Y6W5 498 aa22.82■■□□□ 1.24
TRAPPC4-208ENST00000527680 ZNF821O75541 412 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 ZMPSTE24O75844 475 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 PAK4O96013 591 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 ADRB3P13945 408 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 ACP1P24666 158 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 L1CAMP32004 1257 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 ADRA1BP35368 520 aa22.81■■□□□ 1.24
TRAPPC4-208ENST00000527680 ETFBP38117 255 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms