RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 OR2AT4A6NND4 320 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 MRASO14807 208 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PSMG1O95456 288 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PRKCBP05771 671 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SPARCP09486 303 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 FAM153BP0C7A2 387 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ETS1P14921 441 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 FSHRP23945 695 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 CNTFP26441 200 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SDC2P34741 201 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 MLLT6P55198 1093 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SCN1BQ07699 218 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PTGES3Q15185 160 aaKnown RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 NR6A1Q15406 480 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PABPC1LQ4VXU2 614 aaKnown RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 GET4Q7L5D6 327 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SYNPOQ8N3V7 929 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PRMT6Q96LA8 375 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PPP1R16BQ96T49 567 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 EMILIN2Q9BXX0 1053 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PDGFDQ9GZP0 370 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 STN1Q9H668 368 aaKnown RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 TREM1Q9NP99 234 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PNPLA3Q9NST1 481 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 DDX20Q9UHI6 824 aaKnown RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 GMPPBQ9Y5P6 360 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF521Q96K83 1311 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ANXA9O76027 345 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PDGFRBP09619 1106 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 NR2F6P10588 404 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 UQCRBP14927 111 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PDGFRAP16234 1089 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SP100P23497 879 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 CREMQ03060 361 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 TWF1Q12792 350 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PRKG2Q13237 762 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 LCN1P1Q5VSP4 162 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PAGE2Q7Z2X7 111 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SLC22A9Q8IVM8 553 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF276Q8N554 614 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SDR42E1Q8WUS8 393 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 FATE1Q969F0 183 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF560Q96MR9 790 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 RIT2Q99578 217 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 AASSQ9UDR5 926 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 UTYO14607 1347 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ZSCAN5BA6NJL1 495 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 I3L521 148 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 CCRL2O00421 344 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 TLL1O43897 1013 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ORC5O43913 435 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 LCP1P13796 627 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 IFNAR1P17181 557 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 TGM2P21980 687 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 FDFT1P37268 417 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 TBRG1Q3YBR2 411 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 MTSS1LQ765P7 747 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SLCO6A1Q86UG4 719 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 CLYBLQ8N0X4 340 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 TMEM132CQ8N3T6 1108 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 IKZF3Q9UKT9 509 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ANKRD6Q9Y2G4 727 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PCDHB6Q9Y5E3 794 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ATXN2Q99700 1313 aaKnown RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 TRIM64A6NGJ6 449 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 TRIM64BA6NI03 449 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 TXNP10599 105 aaKnown RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 CLUP10909 449 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SRCP12931 536 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 RRM1P23921 792 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 RBM34P42696 430 aaKnown RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ALDH1A3P47895 512 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PIK3CGP48736 1102 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 PHC1P78364 1004 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ILF3Q12906 894 aaKnown RBP eCLIP7.33□□□□□ -1.242e-7■■□□□ 13.8
CTNND1-216ENST00000527467 SLC18A3Q16572 532 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SLC5A9Q2M3M2 681 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 IL31Q6EBC2 164 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ANO7Q6IWH7 933 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 ZNF677Q86XU0 584 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 EIF1ADQ8N9N8 165 aaKnown RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SLC35G2Q8TBE7 412 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SPATA18Q8TC71 538 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 USP7Q93009 1102 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 C2orf40Q9H1Z8 148 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 CATSPERBQ9H7T0 1116 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 FAM217BQ9NTX9 383 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-216ENST00000527467 CDH7Q9ULB5 785 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 INVSQ9Y283 1065 aa7.33□□□□□ -1.24
CTNND1-216ENST00000527467 SIGLEC1Q9BZZ2 1709 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 SSU72P8A0A1W2PR75 194 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 C17orf102A2RUQ5 167 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CASKO14936 926 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 SULT1B1O43704 296 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 PRKD3O94806 890 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 SERPINF2P08697 491 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 RBP3P10745 1247 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 SLC2A4P14672 509 aa7.32□□□□□ -1.24
CTNND1-216ENST00000527467 CPA3P15088 417 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms