RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SLC25A13Q9UJS0 675 aa2.89□□□□□ -1.95
ECHDC1-219ENST00000526299 A0A0U1RQJ8 604 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 PCDH17O14917 1159 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 FCGR2AP12318 317 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 PRKCHP24723 683 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 KLRK1P26718 216 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 HOXC13P31276 330 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 AKT1P31749 480 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 PRIM2P49643 509 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 OAZ1P54368 228 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 ATP12AP54707 1039 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 CYP4A11Q02928 519 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 ZACNQ401N2 412 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 SYTL3Q4VX76 610 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 LCE3AQ5TA76 89 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 HIBCHQ6NVY1 386 aaPredicted RBP2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 TUBA1AQ71U36 451 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 C14orf80Q86SX3 495 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 ZDHHC23Q8IYP9 409 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 ZNF566Q969W8 418 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 SCMH1Q96GD3 660 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 TUBA1CQ9BQE3 449 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 HDHD5Q9BXW7 423 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 LHPPQ9H008 270 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 TCEAL9Q9UHQ7 104 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 CNTN6Q9UQ52 1028 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 PCDHA10Q9Y5I2 948 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 NOTCH2Q04721 2471 aa2.88□□□□□ -1.95
ECHDC1-219ENST00000526299 MST1RQ04912 1400 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 DYTNA2CJ06 578 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 DDTLA6NHG4 134 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 AGAP5A6NIR3 686 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 RASA4BC9J798 803 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 CLDN7O95471 211 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 GLP2RO95838 553 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 KCNA5P22460 613 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 TMEM268Q5VZI3 342 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 MTFR2Q6P444 385 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 KIAA1324Q6UXG2 1013 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 MARK2Q7KZI7 788 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 SERPINA11Q86U17 422 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 KRTAP7-1Q8IUC3 87 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 VPS52Q8N1B4 723 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 WDSUB1Q8N9V3 476 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 SECTM1Q8WVN6 248 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 TMEM18Q96B42 140 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 TIFAQ96CG3 184 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 TMEM248Q9NWD8 314 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 SLC52A1Q9NWF4 448 aa2.87□□□□□ -1.95
ECHDC1-219ENST00000526299 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 NPIPB11E5RHQ5 1161 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 RNMTO43148 476 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 TSPAN6O43657 245 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 AMBPP02760 352 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 CKMT1AP12532 417 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 PRPH2P23942 346 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 GSTM2P28161 218 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 TYK2P29597 1187 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 CLCNKBP51801 687 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 ZNF132P52740 706 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 RCAN1P53805 252 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 ALDH18A1P54886 795 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 PMS2P11Q13670 270 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 RAB30Q15771 203 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 ARL6IP4Q66PJ3 421 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 RNF144BQ7Z419 303 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 NRSN1Q8IZ57 195 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 RBFAQ8N0V3 343 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 ENDOVQ8N8Q3 282 aaKnown RBP2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 TTC8Q8TAM2 541 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 FAR1Q8WVX9 515 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 ANKRD9Q96BM1 317 aaPredicted RBP2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 FEM1CQ96JP0 617 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 TRIM31Q9BZY9 425 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 UBTD1Q9HAC8 227 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 STARD7Q9NQZ5 370 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 NFU1Q9UMS0 254 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 PHTF1Q9UMS5 762 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 SLC45A1Q9Y2W3 748 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 CEP83Q9Y592 693 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 SMAD5-AS1Q9Y6J3 95 aa2.86□□□□□ -1.95
ECHDC1-219ENST00000526299 IGHV4OR15-8A0A075B7B6 117 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 FAM172BPA6NC97 362 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 HNRNPCL2B2RXH8 293 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 P2RY10O00398 339 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 PIP5K1BO14986 540 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 DNPH1O43598 174 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 BAG4O95429 457 aaKnown RBP2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 MMP3P08254 477 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 ZNF883P0CG24 379 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 AZU1P20160 251 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 EEF1GP26641 437 aaKnown RBP2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 SSTR2P30874 369 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 RPL3P39023 403 aaKnown RBP2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 NOVP48745 357 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 SF3A3Q12874 501 aaKnown RBP eCLIP2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 DHX34Q14147 1143 aaKnown RBP2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 FAM209BQ5JX69 171 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 PLA2G4FQ68DD2 849 aa2.85□□□□□ -1.95
ECHDC1-219ENST00000526299 TRIM74Q86UV6 250 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms