RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SEC24AO95486 1093 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 PRAMEF12O95522 483 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 PDCP20941 246 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 ZNF267Q14586 743 aaPredicted RBP7.48□□□□□ -1.21
NEDD8-203ENST00000524927 SSPNQ14714 243 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 PDGFRLQ15198 375 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 HSP90AB4PQ58FF6 505 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 EOGTQ5NDL2 527 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 STXBP5Q5T5C0 1151 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 SWSAP1Q6NVH7 229 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 MIS18BP1Q6P0N0 1132 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 FAM180AQ6UWF9 173 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 FAM129CQ86XR2 697 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 GRAMD1CQ8IYS0 662 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 KBTBD3Q8NAB2 608 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 SLC35G2Q8TBE7 412 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 RABGGTAQ92696 567 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 VCPIP1Q96JH7 1222 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 FAM167AQ96KS9 214 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 MAP3K14Q99558 947 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 FDXACB1Q9BRP7 624 aaPredicted RBP7.48□□□□□ -1.21
NEDD8-203ENST00000524927 SOX7Q9BT81 388 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 GTPBP4Q9BZE4 634 aaKnown RBP7.48□□□□□ -1.21
NEDD8-203ENST00000524927 ZCCHC4Q9H5U6 513 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 DONSONQ9NYP3 566 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 INTUQ9ULD6 942 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 EXOC6BQ9Y2D4 811 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 IPPQ9Y573 584 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 FBN1P35555 2871 aaKnown RBP7.48□□□□□ -1.21
NEDD8-203ENST00000524927 CSMD2Q7Z408 3487 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 TCRBV21S2A2A0A5A6 115 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 DDX3XO00571 662 aaKnown RBP eCLIP7.47□□□□□ -1.212e-10■■□□□ 12.1
NEDD8-203ENST00000524927 PAPSS1O43252 624 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-203ENST00000524927 DAPK3O43293 454 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 DTNBO60941 627 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 SEC24DO94855 1032 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-203ENST00000524927 FSBPO95073 299 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 FGF19O95750 216 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 CCNE2O96020 404 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 PI3P19957 117 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 HOXA11P31270 313 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-203ENST00000524927 ACADVLP49748 655 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 CCT8P50990 548 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 CD69Q07108 199 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 TWF1Q12792 350 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 NOMO1Q15155 1222 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 ARHGAP15Q53QZ3 475 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 TPGS2Q68CL5 300 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 TRIM68Q6AZZ1 485 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 TXNDC5Q8NBS9 432 aaKnown RBP7.47□□□□□ -1.21
NEDD8-203ENST00000524927 HASPINQ8TF76 798 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 HPS3Q969F9 1004 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 SGF29Q96ES7 293 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 MTMR9Q96QG7 549 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 CCNL2Q96S94 520 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-203ENST00000524927 PAAF1Q9BRP4 392 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 HAPLN2Q9GZV7 340 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 ADNPQ9H2P0 1102 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 PRKRIP1Q9H875 184 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-203ENST00000524927 KAT14Q9H8E8 782 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 ASCL3Q9NQ33 180 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 DMRT3Q9NQL9 472 aa7.47□□□□□ -1.21
NEDD8-203ENST00000524927 CNOT6Q9ULM6 557 aaKnown RBP7.47□□□□□ -1.21
NEDD8-203ENST00000524927 STAB1Q9NY15 2570 aa7.46□□□□□ -1.21
NEDD8-203ENST00000524927 CCDC154A6NI56 674 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 KLRF2D3W0D1 207 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 SGK1O00141 431 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 SYNCRIPO60506 623 aaKnown RBP7.46□□□□□ -1.22
NEDD8-203ENST00000524927 MYL1P05976 194 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 PCP11498 1178 aaKnown RBP7.46□□□□□ -1.22
NEDD8-203ENST00000524927 ARSAP15289 507 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 RPL13P26373 211 aaKnown RBP7.46□□□□□ -1.22
NEDD8-203ENST00000524927 KIF5BP33176 963 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 MEOX1P50221 254 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 CYP4A11Q02928 519 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 ITGB3BPQ13352 177 aaPredicted RBP7.46□□□□□ -1.22
NEDD8-203ENST00000524927 EIF4HQ15056 248 aaKnown RBP7.46□□□□□ -1.22
NEDD8-203ENST00000524927 PRR31Q5SQ13 230 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 TSHZ3Q63HK5 1081 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 PPP4R4Q6NUP7 873 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 USP17L6PQ6QN14 398 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 SPNS3Q6ZMD2 512 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 USP45Q70EL2 814 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 HACE1Q8IYU2 909 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 BCL6BQ8N143 479 aaPredicted RBP7.46□□□□□ -1.22
NEDD8-203ENST00000524927 ZCCHC9Q8N567 271 aaKnown RBP7.46□□□□□ -1.22
NEDD8-203ENST00000524927 ALLCQ8N6M5 410 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 ENAHQ8N8S7 591 aaPredicted RBP7.46□□□□□ -1.22
NEDD8-203ENST00000524927 NUDT10Q8NFP7 164 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 SPATA3Q8NHX4 192 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 NUDT11Q96G61 164 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 ECT2Q9H8V3 914 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 POLR1BQ9H9Y6 1135 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 CALCOCO1Q9P1Z2 691 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 LIMCH1Q9UPQ0 1083 aa7.46□□□□□ -1.22
NEDD8-203ENST00000524927 LRRK1Q38SD2 2015 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 MEIS2O14770 477 aa7.45□□□□□ -1.22
NEDD8-203ENST00000524927 BCAT2O15382 392 aaPredicted RBP7.45□□□□□ -1.22
NEDD8-203ENST00000524927 HTRA2O43464 458 aaPredicted RBP7.45□□□□□ -1.22
NEDD8-203ENST00000524927 AKR1B10O60218 316 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms