RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ZCWPW1Q9H0M4 648 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 TMX4Q9H1E5 349 aaPredicted RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 ERVK-5Q9HDB9 667 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 TXNRD2Q9NNW7 524 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 KCNK9Q9NPC2 374 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 HEYLQ9NQ87 328 aaPredicted RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 FSCN3Q9NQT6 498 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 TBC1D23Q9NUY8 699 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 UTS2RQ9UKP6 389 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 ATP6V0A2Q9Y487 856 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 GVINP1Q7Z2Y8 2422 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 ZFHX4Q86UP3 3567 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 RPAP1Q9BWH6 1393 aaPredicted RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 UNC79Q9P2D8 2635 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 ACACBO00763 2458 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 ANKRD31Q8N7Z5 1873 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 CASP8AP2Q9UKL3 1982 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 MAST4O15021 2626 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 LRRC37AA6NMS7 1700 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 hCG_2014768A0A024R1R8 64 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 A0A1W2PPC4 97 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 H0YGN5 161 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 MARCH6O60337 910 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 USP12O75317 370 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 LCATP04180 440 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 U2AF1L5P0DN76 240 aaPredicted RBP1.92□□□□□ -2.1
CD44-212ENST00000524922 KRT10P13645 584 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 RPL17P18621 184 aaKnown RBP1.92□□□□□ -2.1
CD44-212ENST00000524922 DRD1P21728 446 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 IBSPP21815 317 aaPredicted RBP1.92□□□□□ -2.1
CD44-212ENST00000524922 NF2P35240 595 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 PIK3CBP42338 1070 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 EPS15P42566 896 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 RASSF2P50749 326 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 U2AF1Q01081 240 aaKnown RBP eCLIP1.92□□□□□ -2.1
CD44-212ENST00000524922 ZNF543Q08ER8 600 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 TRAF1Q13077 416 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 GPS1Q13098 491 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 ATP1A4Q13733 1029 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 DAG1Q14118 895 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 SLC5A9Q2M3M2 681 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 ARHGAP29Q52LW3 1261 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 PARP10Q53GL7 1025 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 HSP90AB2PQ58FF8 381 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 C1orf141Q5JVX7 400 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 DGKKQ5KSL6 1271 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 SLC10A5Q5PT55 438 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 C6orf10Q5SRN2 563 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 ODR4Q5SWX8 454 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 C9orf50Q5SZB4 431 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 KLHDC7AQ5VTJ3 777 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 LIPMQ5VYY2 423 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 ISM2Q6H9L7 571 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 CAPRIN2Q6IMN6 1127 aaKnown RBP1.92□□□□□ -2.1
CD44-212ENST00000524922 MRNIPQ6NTE8 343 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 CCDC144NLQ6NUI1 221 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 MSANTD2Q6P1R3 559 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 RNF44Q7L0R7 432 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 KDELC2Q7Z4H8 507 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 UEVLDQ8IX04 471 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 ADGRF4Q8IZF3 695 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 ADGRF3Q8IZF5 1079 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 TDHQ8IZJ6 230 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 FBXL14Q8N1E6 418 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 LMO3Q8TAP4 145 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 ABHD5Q8WTS1 349 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 TMEM174Q8WUU8 243 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 IPCEF1Q8WWN9 437 aaPredicted RBP1.92□□□□□ -2.1
CD44-212ENST00000524922 NPIPB3Q92617 1050 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 ZNF622Q969S3 477 aaKnown RBP eCLIP1.92□□□□□ -2.1
CD44-212ENST00000524922 DCPSQ96C86 337 aaKnown RBP1.92□□□□□ -2.1
CD44-212ENST00000524922 RBM17Q96I25 401 aaKnown RBP1.92□□□□□ -2.1
CD44-212ENST00000524922 CLMNQ96JQ2 1002 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 GPR78Q96P69 363 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 PAAF1Q9BRP4 392 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 RBM38Q9H0Z9 239 aaKnown RBP1.92□□□□□ -2.1
CD44-212ENST00000524922 AAMDCQ9H7C9 122 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 ZNF556Q9HAH1 456 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 SIRT3Q9NTG7 399 aaPredicted RBP1.92□□□□□ -2.1
CD44-212ENST00000524922 MYO1AQ9UBC5 1043 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 PLEKHB1Q9UF11 243 aaPredicted RBP1.92□□□□□ -2.1
CD44-212ENST00000524922 SRP68Q9UHB9 627 aaKnown RBP1.92□□□□□ -2.1
CD44-212ENST00000524922 G3BP2Q9UN86 482 aaKnown RBP1.92□□□□□ -2.1
CD44-212ENST00000524922 LAMP3Q9UQV4 416 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 ZBTB1Q9Y2K1 713 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 PCDHGB6Q9Y5F9 930 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 ABCC12Q96J65 1359 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 HEG1Q9ULI3 1381 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 FAM208BQ5VWN6 2430 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 CHD6Q8TD26 2715 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 EYSQ5T1H1 3165 aa1.92□□□□□ -2.1
CD44-212ENST00000524922 DDX60Q8IY21 1712 aaKnown RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 SLX4Q8IY92 1834 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 AKAP11Q9UKA4 1901 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 DOCK7Q96N67 2140 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 RIF1Q5UIP0 2472 aaKnown RBP1.91□□□□□ -2.1
CD44-212ENST00000524922 COL4A5P29400 1685 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 LOC105369274A0A096LPK9 316 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 LOC102723532A0A0G2JNH3 316 aa1.91□□□□□ -2.1
CD44-212ENST00000524922 VSTM5A8MXK1 200 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms