RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 TTC31Q49AM3 519 aaPredicted RBP16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 ATP13A4Q4VNC1 1196 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 LINGO4Q6UY18 593 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 ARMCX6Q7L4S7 300 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 LPCAT2Q7L5N7 544 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 CACUL1Q86Y37 369 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 CPNE8Q86YQ8 564 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 LRRC8AQ8IWT6 810 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 DEFB119Q8N690 84 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 TSC1Q92574 1164 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 ISG20Q96AZ6 181 aaKnown RBP16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 RMDN1Q96DB5 314 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 HMCESQ96FZ2 354 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 CALN1Q9BXU9 219 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 SLC39A8Q9C0K1 460 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 MTG2Q9H4K7 406 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 USP36Q9P275 1121 aaKnown RBP16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 NCKAP1Q9Y2A7 1128 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 ALG6Q9Y672 507 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 PI4KAP42356 2102 aa16.93■□□□□ 0.3
CSGALNACT1-216ENST00000524213 RCCD1A6NED2 376 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 ZNF487B1APH4 448 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 C1QTNF3-AMACRE9PGA6 284 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 MCF2LO15068 1137 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 PSTPIP1O43586 416 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 BUB1O43683 1085 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 MT-CO1P00395 513 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 ZNF806P0C7X5 589 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 KDELR1P24390 212 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 PTGER3P43115 390 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 ID4P47928 161 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 RPL6Q02878 288 aaKnown RBP16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 DPYSL3Q14195 570 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 RSPO4Q2I0M5 234 aaPredicted RBP16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 INO80DQ53TQ3 878 aaPredicted RBP16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 FAM46CQ5VWP2 391 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 AFMIDQ63HM1 303 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 C22orf39Q6P5X5 142 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 CYP2U1Q7Z449 544 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 DAAM2Q86T65 1068 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 PLPP6Q8IY26 295 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 STK40Q8N2I9 435 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 TPCN2Q8NHX9 752 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 CELF6Q96J87 481 aaKnown RBP16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 TSGA10Q9BZW7 698 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 TFR2Q9UP52 801 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 ADAMTS9Q9P2N4 1935 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 GON4LQ3T8J9 2241 aa16.92■□□□□ 0.3
CSGALNACT1-216ENST00000524213 GDF9O60383 454 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 ADH1BP00325 375 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 IGLV3-19P01714 112 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 C5AR1P21730 350 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 PAPOLAP51003 745 aaKnown RBP16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 SPDYCQ5MJ68 293 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 TCEAL6Q6IPX3 200 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 Q6ZVU0 165 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 LRRC49Q8IUZ0 686 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 MMAAQ8IVH4 418 aaKnown RBP16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 TCEAL3Q969E4 200 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 FAM129BQ96TA1 746 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 LACRTQ9GZZ8 138 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 KLC2Q9H0B6 622 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 VPS45Q9NRW7 570 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 UBA2Q9UBT2 640 aaPredicted RBP16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 NUMA1Q14980 2115 aa16.91■□□□□ 0.3
CSGALNACT1-216ENST00000524213 LRRD1A4D1F6 860 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 PRR5-ARHGAP8B1AHC4 643 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 K7ERQ8 282 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 DFFAO00273 331 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 SMAD6O43541 496 aaKnown RBP16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 BNIP3LO60238 219 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 NDUFS2O75306 463 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 CD160O95971 181 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 KRT1P04264 644 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 CD48P09326 243 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 VAV1P15498 845 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 IL4RP24394 825 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 CD6P30203 668 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 SLC8A1P32418 973 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 TPMTP51580 245 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 SNRPD1P62314 119 aaKnown RBP16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 ARHGAP8P85298 464 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 IL10RBQ08334 325 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 MMRN1Q13201 1228 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 CST6Q15828 149 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 ANKRD20A8PQ5CZ79 823 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 CARD16Q5EG05 197 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 USP30Q70CQ3 517 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 ARHGAP12Q8IWW6 846 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 SYCE1Q8N0S2 351 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 C12orf50Q8NA57 414 aaPredicted RBP16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 PIGKQ92643 395 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 FAF2Q96CS3 445 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 DESI2Q9BSY9 194 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 MAK16Q9BXY0 300 aaKnown RBP16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 PABPC3Q9H361 631 aaKnown RBP16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 SP110Q9HB58 689 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 RXFP3Q9NSD7 469 aa16.9■□□□□ 0.3
CSGALNACT1-216ENST00000524213 WSB2Q9NYS7 404 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms