RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SLC39A8Q9C0K1 460 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 NRDE2Q9H7Z3 1164 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 BTBD7Q9P203 1132 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 DDX20Q9UHI6 824 aaKnown RBP16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 SLC27A6Q9Y2P4 619 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 GCATO75600 419 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 MTMR14Q8NCE2 650 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 NSMCE2Q96MF7 247 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 DCLRE1BQ9H816 532 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 APODP05090 189 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 NOS3P29474 1203 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 GPR158Q5T848 1215 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 SYT12Q8IV01 421 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 PRKAG3Q9UGI9 489 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 ZNHIT2Q9UHR6 403 aa16.46■□□□□ 0.23
PCDHA3-201ENST00000522353 CNTNAP1P78357 1384 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 hCG_2014768A0A024R1R8 64 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 C1orf232A0A0U1RR37 186 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 LRRC10BA6NIK2 292 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 S100A3P33764 101 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 DUSP4Q13115 394 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 CRYMQ14894 314 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 FAM45BPQ6NSW5 357 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 MTDHQ86UE4 582 aaKnown RBP16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 KYQ8NBH2 561 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 FAM45AQ8TCE6 357 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 ERLEC1Q96DZ1 483 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 FAIM2Q9BWQ8 316 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 ZMYM5Q9UJ78 669 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 KLHL20Q9Y2M5 609 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 AP3M1Q9Y2T2 418 aa16.46■□□□□ 0.22
PCDHA3-201ENST00000522353 PPLO60437 1756 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 CLUHO75153 1309 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 MAGEC1O60732 1142 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 SERPINI2O75830 405 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 NFATC1O95644 943 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 GJB1P08034 283 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 ENO2P09104 434 aaPredicted RBP16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 PSMC3P17980 439 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 PTPN4P29074 926 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 RPL21P46778 160 aaKnown RBP16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 ZNHIT3Q15649 155 aaPredicted RBP16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 MEA1Q16626 185 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 KYAT3Q6YP21 454 aaKnown RBP16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 ATAD3AQ9NVI7 634 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 DLGAP2Q9P1A6 1054 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 AGO1Q9UL18 857 aaKnown RBP16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 SMIM22K7EJ46 135 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 SERPINB3P29508 390 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 CLCN5P51795 746 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 KLHL35Q6PF15 583 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 SLC30A9Q6PML9 568 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 APLFQ8IW19 511 aaPredicted RBP16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 TMEM132CQ8N3T6 1108 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 ZCCHC9Q8N567 271 aaKnown RBP16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 CNBD2Q96M20 576 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 PHACTR1Q9C0D0 580 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 PCDHA2Q9Y5H9 948 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 KIF1CO43896 1103 aaKnown RBP16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 CYP1A2P05177 515 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 C21orf59P57076 290 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 C16orf72Q14CZ0 275 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 FAM98BQ52LJ0 330 aaKnown RBP16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 SDHAF4Q5VUM1 108 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 POLNQ7Z5Q5 900 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 TLR10Q9BXR5 811 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 SIK3Q9Y2K2 1263 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 POLR1DQ9Y2S0 133 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 CLDN11O75508 207 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 SLC35G4P0C7Q5 338 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 NFKB1P19838 968 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 ABL2P42684 1182 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 TRAF2Q12933 501 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 BMT2Q1RMZ1 405 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 MAB21L3Q8N8X9 362 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 PRDM12Q9H4Q4 367 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 ADPRHL2Q9NX46 363 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 SNX6Q9UNH7 406 aa16.45■□□□□ 0.22
PCDHA3-201ENST00000522353 TRMT5Q32P41 509 aaKnown RBP16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 BEND7Q8N7W2 519 aaPredicted RBP16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 POMGNT2Q8NAT1 580 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 OR52K1Q8NGK4 314 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 SELENOMQ8WWX9 145 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 EPS8L2Q9H6S3 715 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 LZTS1Q9Y250 596 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 SMIM28A0A1B0GU29 152 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 B4GALT4O60513 344 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 LTA4HP09960 611 aaKnown RBP16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 SPATA31C1P0DKV0 1188 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 LPOP22079 712 aaPredicted RBP16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 UGCGQ16739 394 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 OTOP2Q7RTS6 562 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 C12orf56Q8IXR9 622 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 ZFP28Q8NHY6 868 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 HEXDCQ8WVB3 486 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 NINJ2Q9NZG7 142 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 CROTQ9UKG9 612 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 AP5Z1O43299 807 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 ERCC2P18074 760 aa16.44■□□□□ 0.22
PCDHA3-201ENST00000522353 IFNGR2P38484 337 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms