RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 COL4A2P08572 1712 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 C2CD4DB7Z1M9 353 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 J3KR12 359 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 ZMPSTE24O75844 475 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 PABPC1P11940 636 aaKnown RBP13.31□□□□□ -0.28
CPNE3-205ENST00000522240 ETS1P14921 441 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 ITIH2P19823 946 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 MZF1P28698 734 aaPredicted RBP13.31□□□□□ -0.28
CPNE3-205ENST00000522240 HLA-FP30511 346 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 PLA2G5P39877 138 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 ADCY8P40145 1251 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 VPS41P49754 854 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 NRLP54845 237 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 VSNL1P62760 191 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 NR1H3Q13133 447 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 GAB4Q2WGN9 574 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 PUS10Q3MIT2 529 aaKnown RBP13.31□□□□□ -0.28
CPNE3-205ENST00000522240 IZUMO3Q5VZ72 239 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 PRUNE1Q86TP1 453 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 METTL3Q86U44 580 aaKnown RBP13.31□□□□□ -0.28
CPNE3-205ENST00000522240 HOOK3Q86VS8 718 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 ETFBKMTQ8IXQ9 262 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 BBS5Q8N3I7 341 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 TEKT5Q96M29 485 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 SPON2Q9BUD6 331 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 TRMT61BQ9BVS5 477 aaKnown RBP13.31□□□□□ -0.28
CPNE3-205ENST00000522240 PARD6BQ9BYG5 372 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 PLA2G2FQ9BZM2 168 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 GBA3Q9H227 469 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 EBF3Q9H4W6 596 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 ECT2Q9H8V3 914 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 ABCB8Q9NUT2 735 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 UBA2Q9UBT2 640 aaPredicted RBP13.31□□□□□ -0.28
CPNE3-205ENST00000522240 GGA2Q9UJY4 613 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 CLEC4EQ9ULY5 219 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 SHOC2Q9UQ13 582 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 FAM50BQ9Y247 325 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 SLC27A6Q9Y2P4 619 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 SNX24Q9Y343 169 aa13.31□□□□□ -0.28
CPNE3-205ENST00000522240 ESYT3A0FGR9 886 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 ARNTLO00327 626 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 NEBLO76041 1014 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 JCHAINP01591 159 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 CD70P32970 193 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 HSPA9P38646 679 aaKnown RBP13.3□□□□□ -0.28
CPNE3-205ENST00000522240 EIF2DP41214 584 aaKnown RBP13.3□□□□□ -0.28
CPNE3-205ENST00000522240 MAGEA6P43360 314 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 MMP13P45452 471 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 ARF5P84085 180 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 SULT2A1Q06520 285 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 SEMA5AQ13591 1074 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 RUNX3Q13761 415 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 GRM2Q14416 872 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 LBRQ14739 615 aaKnown RBP13.3□□□□□ -0.28
CPNE3-205ENST00000522240 MORF4L2Q15014 288 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 PARP6Q2NL67 630 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 PITRM1Q5JRX3 1037 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 RNASEH2BQ5TBB1 312 aaKnown RBP13.3□□□□□ -0.28
CPNE3-205ENST00000522240 MARC1Q5VT66 337 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 ALG1LQ6GMV1 187 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 KLHDC8BQ8IXV7 354 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 PPIL6Q8IXY8 311 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 AHI1Q8N157 1196 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 ZFYVE19Q96K21 471 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 EIF2B3Q9NR50 452 aaKnown RBP13.3□□□□□ -0.28
CPNE3-205ENST00000522240 RAB6BQ9NRW1 208 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 DNAJC17Q9NVM6 304 aaKnown RBP13.3□□□□□ -0.28
CPNE3-205ENST00000522240 SEPT3Q9UH03 358 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 VPS51Q9UID3 782 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 TPX2Q9ULW0 747 aaKnown RBP13.3□□□□□ -0.28
CPNE3-205ENST00000522240 ATP8A1Q9Y2Q0 1164 aa13.3□□□□□ -0.28
CPNE3-205ENST00000522240 CCDC151A5D8V7 595 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 GOLGA6CA6NDK9 693 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 GOLGA6BA6NDN3 693 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.29□□□□□ -0.28
CPNE3-205ENST00000522240 CBX4O00257 560 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 HLA-DQB2P05538 268 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 GOLGA6DP0CG33 693 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 TPSB2P20231 275 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 GLDCP23378 1020 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 PSMB4P28070 264 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 ECHS1P30084 290 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 GDI1P31150 447 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 CD68P34810 354 aaPredicted RBP13.29□□□□□ -0.28
CPNE3-205ENST00000522240 CARSP49589 748 aaKnown RBP13.29□□□□□ -0.28
CPNE3-205ENST00000522240 DGKGP49619 791 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 ITGA8P53708 1063 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 BASP1P80723 227 aaKnown RBP13.29□□□□□ -0.28
CPNE3-205ENST00000522240 CDK16Q00536 496 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 TFF2Q03403 129 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 SLC20A2Q08357 652 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 HLTFQ14527 1009 aaKnown RBP eCLIP13.29□□□□□ -0.28
CPNE3-205ENST00000522240 ZNF235Q14590 738 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 KCNJ11Q14654 390 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 BRD3Q15059 726 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 TPSAB1Q15661 275 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 SLC14A2Q15849 920 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 FUT11Q495W5 492 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 MAP9Q49MG5 647 aa13.29□□□□□ -0.28
CPNE3-205ENST00000522240 INO80DQ53TQ3 878 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms